RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 LRRC66Q68CR7 880 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 IYDQ6PHW0 289 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 TMEM135Q86UB9 458 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 NLRP8Q86W28 1048 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 APLFQ8IW19 511 aaPredicted RBP10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 LZTR1Q8N653 840 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 ARFGAP1Q8N6T3 406 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 PIH1D2Q8WWB5 315 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 SCAMP4Q969E2 229 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 SH3KBP1Q96B97 665 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 HERPUD2Q9BSE4 406 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 STN1Q9H668 368 aaKnown RBP10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 VPS18Q9P253 973 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 KLHL3Q9UH77 587 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 CD84Q9UIB8 345 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 TLK1Q9UKI8 766 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 VPS4AQ9UN37 437 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 SIK3Q9Y2K2 1263 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 PCDHB3Q9Y5E6 796 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 PCDHGA6Q9Y5G7 932 aa10.11□□□□□ -0.79
TNFAIP3-202ENST00000420009 CSMD1Q96PZ7 3565 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 KIR2DS5A0A0G2JLQ3 304 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 A0A0G2JNG1 304 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 KIR2DS3K7RE56 304 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 DAPK3O43293 454 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 FZD6O60353 706 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 DNAJC6O75061 913 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 SEMA7AO75326 666 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 RECKO95980 971 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 C9P02748 559 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 PYGLP06737 847 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 DESP17661 470 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 CTPS1P17812 591 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 MAPK9P45984 424 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 NOP2P46087 812 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 HCAR3P49019 387 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 ZNF135P52742 658 aaPredicted RBP10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 STC1P52823 247 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 GFERP55789 205 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 UBE2IP63279 158 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 ERV3-1Q14264 604 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 KIR2DS5Q14953 304 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 PPP6R3Q5H9R7 873 aaPredicted RBP10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 RALGPS1Q5JS13 557 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 ERMARDQ5T6L9 678 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 ARMC12Q5T9G4 340 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 DCUN1D2Q6PH85 259 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 C6orf15Q6UXA7 325 aaPredicted RBP10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 SLC9B2Q86UD5 537 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 PLXDC1Q8IUK5 500 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 PSTKQ8IV42 348 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 MCOLN2Q8IZK6 566 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 GALNT6Q8NCL4 622 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 CPT1CQ8TCG5 803 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 C9orf72Q96LT7 481 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 SMIM14Q96QK8 99 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 AGAP2Q99490 1192 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 TBC1D10AQ9BXI6 508 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 CUEDC1Q9NWM3 386 aaPredicted RBP10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 OGFRQ9NZT2 677 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 CPNE7Q9UBL6 633 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 PRKAB1Q9Y478 270 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 OAS3Q9Y6K5 1087 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 ZNF106Q9H2Y7 1883 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 ITPR2Q14571 2701 aa10.1□□□□□ -0.79
TNFAIP3-202ENST00000420009 CREBBPQ92793 2442 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 TTLL8A6PVC2 850 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 INPP4BO15327 924 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 TOX3O15405 576 aaPredicted RBP10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 MAFKO60675 156 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 CREG1O75629 220 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 DNAJB5O75953 348 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 SORBS2O94875 1100 aaKnown RBP10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 PDHA1P08559 390 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 F3P13726 295 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 SLC2A4P14672 509 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 ZNF30P17039 623 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 PSMA2P25787 234 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 MAXP61244 160 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 UBE2HP62256 183 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 PTSQ03393 145 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 MAMLD1Q13495 774 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 IL11RAQ14626 422 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 SYCP1Q15431 976 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 CHST15Q7LFX5 561 aaPredicted RBP10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 LYSMD3Q7Z3D4 306 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 AVL9Q8NBF6 648 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 EXD1Q8NHP7 514 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 ZDHHC16Q969W1 377 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 RNF31Q96EP0 1072 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 STAMBPL1Q96FJ0 436 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 AGPAT1Q99943 283 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 RIOK2Q9BVS4 552 aaKnown RBP10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 TRIM55Q9BYV6 548 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 ZNF768Q9H5H4 540 aaKnown RBP10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 UCK1Q9HA47 277 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 SEPT11Q9NVA2 429 aaKnown RBP10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 CWC15Q9P013 229 aaKnown RBP10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 RCOR3Q9P2K3 495 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms