RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 MECRQ9BV79 373 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 FICDQ9BVA6 458 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 IFIH1Q9BYX4 1025 aaKnown RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 GPR62Q9BZJ7 368 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 API5Q9BZZ5 524 aaKnown RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 TTYH3Q9C0H2 523 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 HDHD2Q9H0R4 259 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 C11orf54Q9H0W9 315 aaPredicted RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 P2RY12Q9H244 342 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC26A1Q9H2B4 701 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 PLK3Q9H4B4 646 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 UCK1Q9HA47 277 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 LY9Q9HBG7 655 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 TREM1Q9NP99 234 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 FSCN3Q9NQT6 498 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM207AQ9NSI2 230 aaPredicted RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 OLAHQ9NV23 265 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 NDFIP2Q9NV92 336 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 PANK4Q9NVE7 773 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 FKBP14Q9NWM8 211 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC39A1Q9NY26 324 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 NCKIPSDQ9NZQ3 722 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 TRPM5Q9NZQ8 1165 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CRNNQ9UBG3 495 aaPredicted RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 MGAT4CQ9UBM8 478 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 UBQLN2Q9UHD9 624 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 NAGPAQ9UK23 515 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 MKLN1Q9UL63 735 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CDC14AQ9UNH5 594 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 PLA2G4CQ9UP65 541 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 GAB2Q9UQC2 676 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 MFHAS1Q9Y4C4 1052 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 PCDHA10Q9Y5I2 948 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 DMRT1Q9Y5R6 373 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 TBC1D3DA0A087WVF3 549 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 TBC1D3IA0A087WXS9 549 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 TBC1D3EA0A087X179 549 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 TBC1D3KA0A087X1G2 549 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 A0A0J9YYE9 177 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 A0A1W2PQF6 199 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 TBC1D3BA6NDS4 549 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 TBC1D3FA6NER0 549 aaPredicted RBP3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 TUBAL3A6NHL2 446 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 TTC34A8MYJ7 566 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 TBC1D3LB9A6J9 549 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 GOLGA6L19H0YKK7 550 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 UBE2Q2LH0YL09 131 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 XPO1O14980 1071 aaKnown RBP3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 ZW10O43264 779 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 DHHO43323 396 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 HCRTR2O43614 444 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 LIASO43766 372 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 CCNT1O60563 726 aaKnown RBP3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 DNAJB6O75190 326 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 GPC4O75487 556 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 GCATO75600 419 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 RAD51DO75771 328 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 OR5F1O95221 314 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 CELF2O95319 508 aaKnown RBP3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 CAVIN2O95810 425 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 LDLRP01130 860 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 GASTP01350 101 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 TRBC1P01850 177 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 FUCA1P04066 466 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 CYBBP04839 570 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 RHOP08100 348 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 CHRM2P08172 466 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 SYPP08247 313 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 TBC1D3HP0C7X1 549 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 UMPSP11172 480 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 PIM1P11309 404 aaPredicted RBP3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 ACP5P13686 325 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF18P17022 549 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 CAPN2P17655 700 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 ATP6V1C1P21283 382 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 MSR1P21757 451 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 FGFR3P22607 806 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 APEX1P27695 318 aaKnown RBP3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 AXLP30530 894 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 CSF2RBP32927 897 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 TRHRP34981 398 aaPredicted RBP3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 GSTM5P46439 218 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC6A12P48065 614 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 ME1P48163 572 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC11A1P49279 550 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 SERPINH1P50454 418 aaKnown RBP3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 SMSP52788 366 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 GALCP54803 685 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 GSCP56915 257 aaPredicted RBP3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 RWDD2BP57060 319 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 SRP54P61011 504 aaKnown RBP3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 B2MP61769 119 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 YWHAGP61981 247 aaKnown RBP eCLIP3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 YWHAEP62258 255 aaKnown RBP3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 MZT1Q08AG7 82 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 ACSM2AQ08AH3 577 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF177Q13360 481 aaPredicted RBP3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 XRCC4Q13426 336 aa3.12□□□□□ -1.91
CTDSPL-203ENST00000416688 MTM1Q13496 603 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms