RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SLC30A9Q6PML9 568 aa14.48□□□□□ -0.09
SGCE-202ENST00000415788 TRABD2AQ86V40 505 aa14.48□□□□□ -0.09
SGCE-202ENST00000415788 TRIM69Q86WT6 500 aa14.48□□□□□ -0.09
SGCE-202ENST00000415788 BRSK1Q8TDC3 778 aa14.48□□□□□ -0.09
SGCE-202ENST00000415788 DENND1AQ8TEH3 1009 aa14.48□□□□□ -0.09
SGCE-202ENST00000415788 VCXQ9H320 206 aa14.48□□□□□ -0.09
SGCE-202ENST00000415788 ZFYVE1Q9HBF4 777 aa14.48□□□□□ -0.09
SGCE-202ENST00000415788 KCTD5Q9NXV2 234 aa14.48□□□□□ -0.09
SGCE-202ENST00000415788 BFARQ9NZS9 450 aa14.48□□□□□ -0.09
SGCE-202ENST00000415788 ZNF711Q9Y462 761 aa14.48□□□□□ -0.09
SGCE-202ENST00000415788 C1orf232A0A0U1RR37 186 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 MAP3K13O43283 966 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 LHCGRP22888 699 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 PTPN4P29074 926 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 NUDT1P36639 197 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 GRIA1P42261 906 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 NPY2RP49146 381 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 CCR5P51681 352 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 PDE1BQ01064 536 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 LRRC66Q68CR7 880 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 IRGCQ6NXR0 463 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 ZC3H14Q6PJT7 736 aaKnown RBP14.47□□□□□ -0.09
SGCE-202ENST00000415788 CRTC1Q6UUV9 634 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 LIPIQ6XZB0 460 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 ZNF534Q76KX8 674 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 GLT6D1Q7Z4J2 308 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 HORMAD1Q86X24 394 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 FAM160A2Q8N612 972 aaPredicted RBP14.47□□□□□ -0.09
SGCE-202ENST00000415788 SPDYE1Q8NFV5 336 aaPredicted RBP14.47□□□□□ -0.09
SGCE-202ENST00000415788 BLOC1S5Q8TDH9 187 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 LRRC8CQ8TDW0 803 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 DNAJC9Q8WXX5 260 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 FOXJ1Q92949 421 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 SLC7A6OSQ96CW6 309 aaPredicted RBP14.47□□□□□ -0.09
SGCE-202ENST00000415788 TSC22D3Q99576 134 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 GPR174Q9BXC1 333 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 TBC1D10AQ9BXI6 508 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 IL22Q9GZX6 179 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 STOML1Q9UBI4 398 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 MBD1Q9UIS9 605 aaPredicted RBP14.47□□□□□ -0.09
SGCE-202ENST00000415788 HAO1Q9UJM8 370 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 CACNA1IQ9P0X4 2223 aa14.47□□□□□ -0.09
SGCE-202ENST00000415788 TRIOO75962 3097 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 C10orf142B7Z368 130 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 RNGTTO60942 597 aaKnown RBP14.46□□□□□ -0.09
SGCE-202ENST00000415788 TM7SF2O76062 418 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 CRTAMO95727 393 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 HMGCLP35914 325 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 MXRA7P84157 204 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 RPL6Q02878 288 aaKnown RBP14.46□□□□□ -0.09
SGCE-202ENST00000415788 MSLNQ13421 630 aaPredicted RBP14.46□□□□□ -0.09
SGCE-202ENST00000415788 TMED2Q15363 201 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 TAF1AQ15573 450 aaPredicted RBP14.46□□□□□ -0.09
SGCE-202ENST00000415788 CNGA3Q16281 694 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 CDKN3Q16667 212 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 KIAA0895LQ68EN5 471 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 FAM47EQ6ZV65 393 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 ZCCHC9Q8N567 271 aaKnown RBP14.46□□□□□ -0.09
SGCE-202ENST00000415788 ZFAND2BQ8WV99 257 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 C10orf82Q8WW14 230 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 ASB12Q8WXK4 309 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 C19orf43Q9BQ61 176 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 WRAP53Q9BUR4 548 aaKnown RBP14.46□□□□□ -0.09
SGCE-202ENST00000415788 GPR63Q9BZJ6 419 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 KCNH6Q9H252 994 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 SSU72Q9NP77 194 aaKnown RBP14.46□□□□□ -0.09
SGCE-202ENST00000415788 TBK1Q9UHD2 729 aa14.46□□□□□ -0.09
SGCE-202ENST00000415788 A0A1W2PQU0 124 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 DPPA5A6NC42 116 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 C2orf81A6NN90 581 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 LILRB5O75023 590 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 PIRTP0C851 137 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 C6P13671 934 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 MAGEA4P43358 317 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 CREB5Q02930 508 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 TMEM259Q4ZIN3 620 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 LPCAT2Q7L5N7 544 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 LYSMD3Q7Z3D4 306 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 TSPAN33Q86UF1 283 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 PDIK1LQ8N165 341 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 FRMD1Q8N878 549 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 PTCD2Q8WV60 388 aaKnown RBP14.46□□□□□ -0.1
SGCE-202ENST00000415788 RANBP9Q96S59 729 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 SMC6Q96SB8 1091 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 C1QTNF7Q9BXJ2 289 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 C1QTNF2Q9BXJ5 285 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 IRF2BPLQ9H1B7 796 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 DUSP15Q9H1R2 295 aaPredicted RBP14.46□□□□□ -0.1
SGCE-202ENST00000415788 RAD18Q9NS91 495 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 CPSF2Q9P2I0 782 aaKnown RBP14.46□□□□□ -0.1
SGCE-202ENST00000415788 INVSQ9Y283 1065 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 SPO11Q9Y5K1 396 aa14.46□□□□□ -0.1
SGCE-202ENST00000415788 ANKRD36A6QL64 1941 aa14.45□□□□□ -0.1
SGCE-202ENST00000415788 A0A0C4DFX4 3053 aa14.45□□□□□ -0.1
SGCE-202ENST00000415788 EXOC1LA0A1B0GW35 172 aa14.45□□□□□ -0.1
SGCE-202ENST00000415788 HEATR9A2RTY3 570 aa14.45□□□□□ -0.1
SGCE-202ENST00000415788 EME2A4GXA9 379 aaPredicted RBP14.45□□□□□ -0.1
SGCE-202ENST00000415788 RGSL1A5PLK6 1076 aa14.45□□□□□ -0.1
SGCE-202ENST00000415788 PRR23AA6NEV1 266 aa14.45□□□□□ -0.1
SGCE-202ENST00000415788 ENO4A6NNW6 628 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms