RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 ILF3Q12906 894 aaKnown RBP eCLIP12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 PHF19Q5T6S3 580 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 MARK2Q7KZI7 788 aaKnown RBP12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 ZNF761Q86XN6 746 aaPredicted RBP12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 LRRC49Q8IUZ0 686 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 PLD5Q8N7P1 536 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 KIAA1524Q8TCG1 905 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 SLC37A2Q8TED4 501 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 EXTL1Q92935 676 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 NKD1Q969G9 470 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 TMEM159Q96B96 161 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 TADA1Q96BN2 335 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 TRIB3Q96RU7 358 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 B3GNT4Q9C0J1 378 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 POLR1EQ9GZS1 481 aaKnown RBP12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 BRD8Q9H0E9 1235 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 INTUQ9ULD6 942 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 PCDHGA4Q9Y5G9 962 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 PCDHGA3Q9Y5H0 932 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 COL12A1Q99715 3063 aa12.34□□□□□ -0.43
NCKIPSD-203ENST00000415281 PRR19A6NJB7 356 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 RHPN2P1A8MT19 583 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 J3QKU1 62 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 INPP4BO15327 924 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 THRAP10827 490 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 FECHP22830 423 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 KDELR1P24390 212 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 SERPINB6P35237 376 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 ACTR1BP42025 376 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 FASLGP48023 281 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 ACTR1AP61163 376 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 ITKQ08881 620 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 ZBTB17Q13105 803 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 KRT81Q14533 505 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 CLCA4Q14CN2 919 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 TBR1Q16650 682 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 IFI16Q16666 785 aaKnown RBP12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 CLPPQ16740 277 aaPredicted RBP12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 HADHQ16836 314 aaKnown RBP12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 ZNF648Q5T619 568 aaPredicted RBP12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 HENMT1Q5T8I9 393 aaKnown RBP12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 USP45Q70EL2 814 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 RHOT2Q8IXI1 618 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 NRSN1Q8IZ57 195 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 SFRP1Q8N474 314 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 PAF1Q8N7H5 531 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 JPH3Q8WXH2 748 aaPredicted RBP12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 SGF29Q96ES7 293 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 RNF157Q96PX1 679 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 OR2M4Q96R27 311 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 CMKLR1Q99788 373 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 ZNF670Q9BS34 389 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 SLC12A9Q9BXP2 914 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 PCDH9Q9HC56 1237 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 LUC7LQ9NQ29 371 aaKnown RBP12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 TBC1D29Q9UFV1 150 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 AMACRQ9UHK6 382 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 TMPRSS11EQ9UL52 423 aa12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 TLN1Q9Y490 2541 aaKnown RBP12.33□□□□□ -0.44
NCKIPSD-203ENST00000415281 GOLGA6CA6NDK9 693 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 GOLGA6BA6NDN3 693 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 RCCD1A6NED2 376 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 ANKRD66B4E2M5 251 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 KCNK1O00180 336 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 IPO7O95373 1038 aaKnown RBP12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 JCHAINP01591 159 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 GOLGA6DP0CG33 693 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 ZNF30P17039 623 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 SPINT3P49223 89 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 NFKB2Q00653 900 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 PDK2Q15119 407 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 MAP9Q49MG5 647 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 ZFYVE27Q5T4F4 411 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 TMEM71Q6P5X7 295 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 IYDQ6PHW0 289 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 B4GALNT4Q76KP1 1039 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 ARHGAP22Q7Z5H3 698 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 TMEM139Q8IV31 216 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 RAVER1Q8IY67 606 aaKnown RBP12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 BBS5Q8N3I7 341 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 KCTD6Q8NC69 237 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 ACRBPQ8NEB7 543 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 OR4D9Q8NGE8 314 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 EXD1Q8NHP7 514 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 HDAC11Q96DB2 347 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 STARD5Q9NSY2 213 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 GOLGA6AQ9NYA3 693 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 SLC23A2Q9UGH3 650 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 HYOU1Q9Y4L1 999 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 B3GALT1Q9Y5Z6 326 aa12.32□□□□□ -0.44
NCKIPSD-203ENST00000415281 HGSO14964 777 aaPredicted RBP12.31□□□□□ -0.44
NCKIPSD-203ENST00000415281 MTA2O94776 668 aa12.31□□□□□ -0.44
NCKIPSD-203ENST00000415281 TNNT1P13805 278 aa12.31□□□□□ -0.44
NCKIPSD-203ENST00000415281 CES1P23141 567 aa12.31□□□□□ -0.44
NCKIPSD-203ENST00000415281 CA5AP35218 305 aa12.31□□□□□ -0.44
NCKIPSD-203ENST00000415281 UGT1A3P35503 534 aa12.31□□□□□ -0.44
NCKIPSD-203ENST00000415281 ARHGAP25P42331 645 aa12.31□□□□□ -0.44
NCKIPSD-203ENST00000415281 GSDMDP57764 484 aa12.31□□□□□ -0.44
NCKIPSD-203ENST00000415281 IFI35P80217 286 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms