RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 SUSD3Q96L08 255 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 BIRC8Q96P09 236 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 CYP2S1Q96SQ9 504 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 ADI1Q9BV57 179 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 DNAAF2Q9NVR5 837 aaKnown RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 DHRS12A0PJE2 317 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 PRLP01236 227 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 INHBBP09529 407 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 HGFP14210 728 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 HTR7P34969 479 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 SLC26A3P40879 764 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 CAP1Q01518 475 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 TYSND1Q2T9J0 566 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 TBCELQ5QJ74 424 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 MARC1Q5VT66 337 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 RAP1GAP2Q684P5 730 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 MSANTD2Q6P1R3 559 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 LPCAT2Q7L5N7 544 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 ZNF598Q86UK7 904 aaKnown RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 PTRH1Q86Y79 214 aaKnown RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 DCBLD1Q8N8Z6 715 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 PAPD5Q8NDF8 572 aaKnown RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 C12orf43Q96C57 262 aaKnown RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 AARSD1Q9BTE6 412 aaKnown RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 CLK4Q9HAZ1 481 aaKnown RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 SEMA4BQ9NPR2 832 aaPredicted RBP9.82□□□□□ -0.84
SS18-203ENST00000415083 ACTR3BQ9P1U1 418 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 BCAP29Q9UHQ4 241 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 UTS2RQ9UKP6 389 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 AURKCQ9UQB9 309 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 NOD1Q9Y239 953 aa9.82□□□□□ -0.84
SS18-203ENST00000415083 EI24O14681 340 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 GPC4O75487 556 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 ECI2O75521 394 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 RASAL1O95294 804 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 SNAP29O95721 258 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 RPS17P08708 135 aaKnown RBP9.81□□□□□ -0.84
SS18-203ENST00000415083 EEF1DP29692 281 aaKnown RBP9.81□□□□□ -0.84
SS18-203ENST00000415083 MLLT10P55197 1068 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 TUBA4AP68366 448 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 ITKQ08881 620 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 SERINC3Q13530 473 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 LPIN1Q14693 890 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 MAPRE2Q15555 327 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 RIMKLAQ8IXN7 391 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 PIANPQ8IYJ0 282 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 DNAJB14Q8TBM8 379 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 HM13Q8TCT9 377 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 FUBP1Q96AE4 644 aaKnown RBP9.81□□□□□ -0.84
SS18-203ENST00000415083 FEM1CQ96JP0 617 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 SEMA3CQ99985 751 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 TRMOQ9BU70 441 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 SCN8AQ9UQD0 1980 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 DRGXA6NNA5 263 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 OR1I1O60431 355 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 ZNF623O75123 536 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 C1RP00736 705 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 IGLV3-27P01718 113 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 SLC2A3P11169 496 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 RHOQP17081 205 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 ZNF140P52738 457 aaPredicted RBP9.81□□□□□ -0.84
SS18-203ENST00000415083 STC1P52823 247 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 OR4D2P58180 307 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 ADARB1P78563 741 aaKnown RBP9.81□□□□□ -0.84
SS18-203ENST00000415083 CLCQ05315 142 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 RCAN2Q14206 197 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 TSNQ15631 228 aaKnown RBP9.81□□□□□ -0.84
SS18-203ENST00000415083 NKG7Q16617 165 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 RSPO2Q6UXX9 243 aaPredicted RBP9.81□□□□□ -0.84
SS18-203ENST00000415083 FAM86B1Q8N7N1 296 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 DOK1Q99704 481 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 TIMMDC1Q9NPL8 285 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 SLC8A2Q9UPR5 921 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 SCML2Q9UQR0 700 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 AQP12BA6NM10 295 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 KLK8O60259 260 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 HOXD9P28356 352 aaPredicted RBP9.81□□□□□ -0.84
SS18-203ENST00000415083 SHMT2P34897 504 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 RFC2P35250 354 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 RENBPP51606 427 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 KIF19Q2TAC6 998 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 KCTD21Q4G0X4 260 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 LAIR2Q6ISS4 152 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 Q6ZSR9 355 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 AQP12AQ8IXF9 295 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 PDPRQ8NCN5 879 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 CALML6Q8TD86 181 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 BLOC1S5Q8TDH9 187 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 PPWD1Q96BP3 646 aaKnown RBP9.81□□□□□ -0.84
SS18-203ENST00000415083 ZYG11BQ9C0D3 744 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 AIG1Q9NVV5 245 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 IL37Q9NZH6 218 aa9.81□□□□□ -0.84
SS18-203ENST00000415083 A0A0U1RQF3 1178 aa9.8□□□□□ -0.84
SS18-203ENST00000415083 H3BMQ9 156 aa9.8□□□□□ -0.84
SS18-203ENST00000415083 TFPTP0C1Z6 253 aa9.8□□□□□ -0.84
SS18-203ENST00000415083 SLC6A4P31645 630 aa9.8□□□□□ -0.84
SS18-203ENST00000415083 TRIM32Q13049 653 aa9.8□□□□□ -0.84
SS18-203ENST00000415083 CTSL3PQ5NE16 218 aa9.8□□□□□ -0.84
SS18-203ENST00000415083 KLC3Q6P597 504 aa9.8□□□□□ -0.84
SS18-203ENST00000415083 DLEU7Q6UYE1 221 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms