RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ZNF398Q8TD17 642 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 GAB3Q8WWW8 586 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 DNASE2BQ8WZ79 361 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 ZC3H10Q96K80 434 aaKnown RBP13.2□□□□□ -0.3
CNN3-203ENST00000415017 CYTH2Q99418 400 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 FAM167BQ9BTA0 163 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 TEX101Q9BY14 249 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 ARFGAP3Q9NP61 516 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 MBNL1Q9NR56 388 aaKnown RBP13.2□□□□□ -0.3
CNN3-203ENST00000415017 C20orf96Q9NUD7 363 aaPredicted RBP13.2□□□□□ -0.3
CNN3-203ENST00000415017 VPS18Q9P253 973 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 CD84Q9UIB8 345 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 HS3ST3A1Q9Y663 406 aa13.2□□□□□ -0.3
CNN3-203ENST00000415017 A0A1W2PPC4 97 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 TOR1BO14657 336 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 GALR2O43603 387 aaPredicted RBP13.19□□□□□ -0.3
CNN3-203ENST00000415017 UGT1A9O60656 530 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 S1PR4O95977 384 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 SLC4A1P02730 911 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 SP9P0CG40 484 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 PRSS56P0CW18 603 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 UGT1A6P19224 532 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 UGT1A1P22309 533 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 UGT1A4P22310 534 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 UGT1A3P35503 534 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 UGT1A5P35504 534 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 IGFALSP35858 605 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 SGCGQ13326 291 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 STAT4Q14765 748 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 LRRC14Q15048 493 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 SETMARQ53H47 684 aaPredicted RBP13.19□□□□□ -0.3
CNN3-203ENST00000415017 FAM151BQ6UXP7 276 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 CERS6Q6ZMG9 384 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 PTAR1Q7Z6K3 402 aaPredicted RBP13.19□□□□□ -0.3
CNN3-203ENST00000415017 C11orf74Q86VG3 221 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 NXPE1Q8N323 547 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 DDHD1Q8NEL9 900 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 OR6P1Q8NGX9 317 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 CALML6Q8TD86 181 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 BTN2A2Q8WVV5 523 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 SLC44A1Q8WWI5 657 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 SPACA7Q96KW9 195 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 BMFQ96LC9 184 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 ASB8Q9H765 288 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 VPS37BQ9H9H4 285 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 UGT1A7Q9HAW7 530 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 UGT1A10Q9HAW8 530 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 UGT1A8Q9HAW9 530 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 CATSPERZQ9NTU4 200 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 ARGLU1Q9NWB6 273 aaPredicted RBP13.19□□□□□ -0.3
CNN3-203ENST00000415017 IL1RAPL1Q9NZN1 696 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 CACNA1EQ15878 2313 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 GON4LQ3T8J9 2241 aa13.19□□□□□ -0.3
CNN3-203ENST00000415017 FAM86C2PA6NEL3 165 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 GOLGA8KD6RF30 607 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 GOLGA8TH3BQL2 631 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 DYNC1I1O14576 645 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 MAP2K7O14733 419 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 GPR39O43194 453 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 HRO43593 1189 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 AHSGP02765 367 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 SHBGP04278 402 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 ITGALP20701 1170 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 HNRNPA2B1P22626 353 aaKnown RBP13.18□□□□□ -0.3
CNN3-203ENST00000415017 ACRV1P26436 265 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 SLC1A2P43004 574 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 PFN3P60673 137 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 ITIH4Q14624 930 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 IRF4Q15306 451 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 ANGPT1Q15389 498 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 KLHL38Q2WGJ6 581 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 FASTKD1Q53R41 847 aaKnown RBP13.18□□□□□ -0.3
CNN3-203ENST00000415017 LYPLAL1Q5VWZ2 237 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 MRNIPQ6NTE8 343 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 PACS1Q6VY07 963 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 GCNT7Q6ZNI0 430 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 CAPN12Q6ZSI9 719 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 ABI3BPQ7Z7G0 1075 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 LRRC6Q86X45 466 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 TDRPQ86YL5 185 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 DENND6AQ8IWF6 608 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 FAM174AQ8TBP5 190 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 UBLCP1Q8WVY7 318 aaPredicted RBP13.18□□□□□ -0.3
CNN3-203ENST00000415017 LPGAT1Q92604 370 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 GLYATL1Q969I3 302 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 FUBP1Q96AE4 644 aaKnown RBP13.18□□□□□ -0.3
CNN3-203ENST00000415017 ULK4Q96C45 1275 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 C1QTNF7Q9BXJ2 289 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 P2RY12Q9H244 342 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 PPCSQ9HAB8 311 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 IARS2Q9NSE4 1012 aaKnown RBP13.18□□□□□ -0.3
CNN3-203ENST00000415017 INTS10Q9NVR2 710 aaKnown RBP13.18□□□□□ -0.3
CNN3-203ENST00000415017 ZSCAN32Q9NX65 697 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 NSMCE4AQ9NXX6 385 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 ZNF180Q9UJW8 692 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 FBXO5Q9UKT4 447 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 PSAT1Q9Y617 370 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 SLC30A1Q9Y6M5 507 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 CACNA1HO95180 2353 aa13.18□□□□□ -0.3
CNN3-203ENST00000415017 HMX2A2RU54 273 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms