RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 SGCGQ13326 291 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 FGL2Q14314 439 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 WSCD2Q2TBF2 565 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 ATP13A5Q4VNC0 1218 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 ZRANB3Q5FWF4 1079 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 CEP85LQ5SZL2 805 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 LGSNQ5TDP6 509 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 PSAPL1Q6NUJ1 521 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 MICALCLQ6ZW33 695 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 STRA8Q7Z7C7 330 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 SERPINA9Q86WD7 417 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 NXPE1Q8N323 547 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 PGM2Q96G03 612 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 TOE1Q96GM8 510 aaKnown RBP14.16□□□□□ -0.14
SF3B1-204ENST00000414963 TTC1Q99614 292 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 SPATA16Q9BXB7 569 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 C1QTNF7Q9BXJ2 289 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 SLC17A9Q9BYT1 436 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 RHOJQ9H4E5 214 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 SPATA6Q9NWH7 488 aaPredicted RBP14.16□□□□□ -0.14
SF3B1-204ENST00000414963 TXNDC16Q9P2K2 825 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 SLC17A6Q9P2U8 582 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 PSMC3IPQ9P2W1 217 aaPredicted RBP14.16□□□□□ -0.14
SF3B1-204ENST00000414963 CD84Q9UIB8 345 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 TMPRSS11EQ9UL52 423 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 COQ6Q9Y2Z9 468 aa14.16□□□□□ -0.14
SF3B1-204ENST00000414963 SCN8AQ9UQD0 1980 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 IGLV3-16A0A075B6K0 115 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 AXIN1O15169 862 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 OPA1O60313 960 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 FAM155BO75949 473 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 HAUS5O94927 633 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 SOD1P00441 154 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 MYZAPP0CAP1 466 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 PRSS56P0CW18 603 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 TDGF1P13385 188 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 ACRV1P26436 265 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 PMLP29590 882 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 SPRP35270 261 aaPredicted RBP14.15□□□□□ -0.14
SF3B1-204ENST00000414963 NUDT1P36639 197 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 PTGER3P43115 390 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 POLD2P49005 469 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 LIMK2P53671 638 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 MPP1Q00013 466 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 DNAJC3Q13217 504 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 ITIH4Q14624 930 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 KRT71Q3SY84 523 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 SETMARQ53H47 684 aaPredicted RBP14.15□□□□□ -0.14
SF3B1-204ENST00000414963 TNFAIP8L3Q5GJ75 292 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 ADAMTSL4Q6UY14 1074 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 TAS2R42Q7RTR8 314 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 ZC3HC1Q86WB0 502 aaKnown RBP14.15□□□□□ -0.14
SF3B1-204ENST00000414963 TP53I13Q8NBR0 393 aaPredicted RBP14.15□□□□□ -0.14
SF3B1-204ENST00000414963 HEXDCQ8WVB3 486 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 BTN2A2Q8WVV5 523 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 LPGAT1Q92604 370 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 CENPTQ96BT3 561 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 RUFY1Q96T51 708 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 KLF6Q99612 283 aaPredicted RBP14.15□□□□□ -0.14
SF3B1-204ENST00000414963 RBBP8Q99708 897 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 FAM96AQ9H5X1 160 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 TMBIM4Q9HC24 238 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 CNOT6Q9ULM6 557 aaKnown RBP14.15□□□□□ -0.14
SF3B1-204ENST00000414963 CORO1CQ9ULV4 474 aaPredicted RBP14.15□□□□□ -0.14
SF3B1-204ENST00000414963 CYP8B1Q9UNU6 501 aa14.15□□□□□ -0.14
SF3B1-204ENST00000414963 FNDC3AQ9Y2H6 1198 aaKnown RBP14.15□□□□□ -0.14
SF3B1-204ENST00000414963 ZNF106Q9H2Y7 1883 aaKnown RBP14.14□□□□□ -0.15
SF3B1-204ENST00000414963 TLDC2A0PJX2 215 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 HMX2A2RU54 273 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 GOLGA8CPA6NN73 597 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 FADS2P1A8MWK0 482 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 NDUFS3O75489 264 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 KRT37O76014 449 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 KRT38O76015 456 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 PAK4O96013 591 aaPredicted RBP14.14□□□□□ -0.15
SF3B1-204ENST00000414963 SNRPAP09012 282 aaKnown RBP14.14□□□□□ -0.15
SF3B1-204ENST00000414963 CA5AP35218 305 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 TRIM23P36406 574 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 SLCO1A2P46721 670 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 CD151P48509 253 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 PPP2CBP62714 309 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 PPP2CAP67775 309 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 LRRC14Q15048 493 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 SMAD1Q15797 465 aaKnown RBP14.14□□□□□ -0.15
SF3B1-204ENST00000414963 DBN1Q16643 649 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 USP39Q53GS9 565 aaKnown RBP14.14□□□□□ -0.15
SF3B1-204ENST00000414963 KIAA0895LQ68EN5 471 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 PNCKQ6P2M8 343 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 TAOK1Q7L7X3 1001 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 LDB1Q86U70 411 aaPredicted RBP14.14□□□□□ -0.15
SF3B1-204ENST00000414963 FBXL6Q8N531 539 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 OTUD6BQ8N6M0 293 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 DENND6BQ8NEG7 585 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 DDHD1Q8NEL9 900 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 CADM4Q8NFZ8 388 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 GLYATL1Q969I3 302 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 MTBPQ96DY7 904 aa14.14□□□□□ -0.15
SF3B1-204ENST00000414963 MRRFQ96E11 262 aaKnown RBP14.14□□□□□ -0.15
SF3B1-204ENST00000414963 FAM126AQ9BYI3 521 aaPredicted RBP14.14□□□□□ -0.15
SF3B1-204ENST00000414963 TPSD1Q9BZJ3 242 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms