RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 CREB5Q02930 508 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 DLG1Q12959 904 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 RAB33AQ14088 237 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 ZNF460Q14592 562 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 ADGRF1Q5T601 910 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 LIPMQ5VYY2 423 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 CCDC81Q6ZN84 652 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 FSTL5Q8N475 847 aaPredicted RBP12.97□□□□□ -0.33
LITAF-203ENST00000413364 SPON2Q9BUD6 331 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 RNF38Q9H0F5 515 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 AASDHPPTQ9NRN7 309 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 TMEM39AQ9NV64 488 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 UBA2Q9UBT2 640 aaPredicted RBP12.97□□□□□ -0.33
LITAF-203ENST00000413364 AGO1Q9UL18 857 aaKnown RBP12.97□□□□□ -0.33
LITAF-203ENST00000413364 APOBEC2Q9Y235 224 aaKnown RBP12.97□□□□□ -0.33
LITAF-203ENST00000413364 ATP11BQ9Y2G3 1177 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 CHD5Q8TDI0 1954 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.97□□□□□ -0.33
LITAF-203ENST00000413364 A0A1W2PQ67 120 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 H3BNX3 289 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 RHOCP08134 193 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 GLRBP48167 497 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 NUMBP49757 651 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 SGSHP51688 502 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 ARSDP51689 593 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 THOP1P52888 689 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 FOLH1Q04609 750 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 ACVR1Q04771 509 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 ZNF177Q13360 481 aaPredicted RBP12.97□□□□□ -0.33
LITAF-203ENST00000413364 APOFQ13790 326 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 SFT2D3Q587I9 215 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 ZNF789Q5FWF6 425 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 RBM20Q5T481 1227 aaKnown RBP12.97□□□□□ -0.33
LITAF-203ENST00000413364 SETD3Q86TU7 594 aaPredicted RBP12.97□□□□□ -0.33
LITAF-203ENST00000413364 CILP2Q8IUL8 1156 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 ATL1Q8WXF7 558 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 PEX13Q92968 403 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 HDAC10Q969S8 669 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 NXNL1Q96CM4 212 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 PLEKHA8Q96JA3 519 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 PSKH2Q96QS6 385 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 LBHD1Q9BQE6 289 aaPredicted RBP12.97□□□□□ -0.33
LITAF-203ENST00000413364 CDH19Q9H159 772 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 RC3H2Q9HBD1 1191 aaKnown RBP12.97□□□□□ -0.33
LITAF-203ENST00000413364 TAGLN3Q9UI15 199 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 KCTD3Q9Y597 815 aa12.97□□□□□ -0.33
LITAF-203ENST00000413364 A0A1B0GVM2 712 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 C2orf78A6NCI8 922 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 TCAF2A6NFQ2 919 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 TXNDC9O14530 226 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 NDST3O95803 873 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 MYL4P12829 197 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 LAG3P18627 525 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 KPNA2P52292 529 aaKnown RBP12.96□□□□□ -0.33
LITAF-203ENST00000413364 PRAMEP78395 509 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 RFTN1Q14699 578 aaPredicted RBP12.96□□□□□ -0.33
LITAF-203ENST00000413364 RIPOR1Q6ZS17 1223 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 FRA10AC1Q70Z53 315 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 OR6P1Q8NGX9 317 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 TSPAN17Q96FV3 270 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 TRIB3Q96RU7 358 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 CINPQ9BW66 212 aaPredicted RBP12.96□□□□□ -0.33
LITAF-203ENST00000413364 ZNF304Q9HCX3 659 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 SPG21Q9NZD8 308 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 XPR1Q9UBH6 696 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 RIMKLBQ9ULI2 386 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 ACTL7AQ9Y615 435 aa12.96□□□□□ -0.33
LITAF-203ENST00000413364 H3BSA7 217 aa12.96□□□□□ -0.34
LITAF-203ENST00000413364 PRRG1O14668 218 aa12.96□□□□□ -0.34
LITAF-203ENST00000413364 URODP06132 367 aa12.96□□□□□ -0.34
LITAF-203ENST00000413364 ENO1P06733 434 aaKnown RBP12.96□□□□□ -0.34
LITAF-203ENST00000413364 IRF1P10914 325 aa12.96□□□□□ -0.34
LITAF-203ENST00000413364 AOC1P19801 751 aa12.96□□□□□ -0.34
LITAF-203ENST00000413364 TCEA1P23193 301 aaKnown RBP12.96□□□□□ -0.34
LITAF-203ENST00000413364 AQP4P55087 323 aa12.96□□□□□ -0.34
LITAF-203ENST00000413364 TWF1Q12792 350 aa12.96□□□□□ -0.34
LITAF-203ENST00000413364 ILF2Q12905 390 aaKnown RBP12.96□□□□□ -0.34
LITAF-203ENST00000413364 RGS21Q2M5E4 152 aa12.96□□□□□ -0.34
LITAF-203ENST00000413364 FAM117BQ6P1L5 589 aa12.96□□□□□ -0.34
LITAF-203ENST00000413364 RFPL4BQ6ZWI9 263 aa12.96□□□□□ -0.34
LITAF-203ENST00000413364 PTAR1Q7Z6K3 402 aaPredicted RBP12.96□□□□□ -0.34
LITAF-203ENST00000413364 TMCO2Q7Z6W1 182 aaPredicted RBP12.96□□□□□ -0.34
LITAF-203ENST00000413364 DDX53Q86TM3 631 aaKnown RBP12.96□□□□□ -0.34
LITAF-203ENST00000413364 ELMOD1Q8N336 334 aa12.96□□□□□ -0.34
LITAF-203ENST00000413364 ZNF781Q8N8C0 355 aa12.96□□□□□ -0.34
LITAF-203ENST00000413364 BRSK1Q8TDC3 778 aa12.96□□□□□ -0.34
LITAF-203ENST00000413364 WBP2Q969T9 261 aa12.96□□□□□ -0.34
LITAF-203ENST00000413364 MRPL57Q9BQC6 102 aaKnown RBP12.96□□□□□ -0.34
LITAF-203ENST00000413364 ILKAPQ9H0C8 392 aaPredicted RBP12.96□□□□□ -0.34
LITAF-203ENST00000413364 PRR5-ARHGAP8B1AHC4 643 aa12.95□□□□□ -0.34
LITAF-203ENST00000413364 CCL22O00626 93 aa12.95□□□□□ -0.34
LITAF-203ENST00000413364 DLX3O60479 287 aa12.95□□□□□ -0.34
LITAF-203ENST00000413364 TSPAN3O60637 253 aa12.95□□□□□ -0.34
LITAF-203ENST00000413364 TM7SF2O76062 418 aa12.95□□□□□ -0.34
LITAF-203ENST00000413364 S1PR4O95977 384 aa12.95□□□□□ -0.34
LITAF-203ENST00000413364 CLTBP09497 229 aa12.95□□□□□ -0.34
LITAF-203ENST00000413364 GLDCP23378 1020 aa12.95□□□□□ -0.34
LITAF-203ENST00000413364 GRIA4P48058 902 aa12.95□□□□□ -0.34
LITAF-203ENST00000413364 DEFB103AP81534 67 aa12.95□□□□□ -0.34
LITAF-203ENST00000413364 ARHGAP8P85298 464 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms