RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 C18orf63Q68DL7 685 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 TXNDC8Q6A555 127 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 RINLQ6ZS11 566 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 ADGRG6Q86SQ4 1221 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 MAP7D3Q8IWC1 876 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 C11orf53Q8IXP5 236 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 CCDC13Q8IYE1 715 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 OR2T6Q8NHC8 308 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 OLIG1Q8TAK6 271 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 SCRN2Q96FV2 425 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 ZSCAN31Q96LW9 406 aaPredicted RBP1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 SMC6Q96SB8 1091 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 MPHOSPH8Q99549 860 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 ASCL2Q99929 193 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 OPRPNQ99935 248 aaPredicted RBP1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 PKP2Q99959 881 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 TRPC7Q9HCX4 862 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 BPIFA1Q9NP55 256 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 SIX2Q9NPC8 291 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 SLC7A10Q9NS82 523 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 C20orf141Q9NUB4 165 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 ACAD8Q9UKU7 415 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 FAM96BQ9Y3D0 163 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 CEPT1Q9Y6K0 416 aa1.34□□□□□ -2.19
RNU2-55P-201ENST00000411146 COL4A4P53420 1690 aaPredicted RBP1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 A0A1W2PP11 408 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 GOLGA6L9A6NEM1 432 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 MAGEB17A8MXT2 336 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 TEX22C9J3V5 150 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 PSMD14O00487 310 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 SH2B2O14492 632 aaPredicted RBP1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 VCYO14598 125 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 SEC14L5O43304 696 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 NADKO95544 446 aaPredicted RBP1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 TFP02787 698 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 NR3C1P04150 777 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 CD58P19256 250 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 POLR2CP19387 275 aaPredicted RBP1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 SHC1P29353 583 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 HTR3AP46098 478 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 TBX4P57082 545 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 KRT24Q2M2I5 525 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 TCTN1Q2MV58 587 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 ALG11Q2TAA5 492 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 TMEM35AQ53FP2 167 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 KRTCAP3Q53RY4 240 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 ZNF774Q6NX45 483 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 METTL2BQ6P1Q9 378 aaKnown RBP1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 CPLX2Q6PUV4 134 aaKnown RBP1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 MFSD6Q6ZSS7 791 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 SCML4Q8N228 414 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 AMER3Q8N944 861 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 DDHD1Q8NEL9 900 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 MAGEC3Q8TD91 643 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 APBB2Q92870 758 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 OTULINQ96BN8 352 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 ABHD8Q96I13 439 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 METTL2AQ96IZ6 378 aaKnown RBP1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 SLC41A2Q96JW4 573 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 ZNF300Q96RE9 604 aaPredicted RBP1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 CD180Q99467 661 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 REEP2Q9BRK0 252 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 LRMDAQ9H2I8 198 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 FKRPQ9H9S5 495 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 PLCB1Q9NQ66 1216 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 ZNF71Q9NQZ8 489 aaPredicted RBP1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 ACSS1Q9NUB1 689 aaPredicted RBP1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 INTS10Q9NVR2 710 aaKnown RBP1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 TMEM160Q9NX00 188 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 ALKBH4Q9NXW9 302 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 MARCH4Q9P2E8 410 aaPredicted RBP1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 TAGLN3Q9UI15 199 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 HSF4Q9ULV5 492 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 JRKLQ9Y4A0 524 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 ZHX2Q9Y6X8 837 aa1.33□□□□□ -2.2
RNU2-55P-201ENST00000411146 MEIOCA2RUB1 952 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 TMEM178BH3BS89 294 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 LDLRAD4O15165 306 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 PPM1GO15355 546 aaPredicted RBP1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 ARHGEF9O43307 516 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 PRC1O43663 620 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 NBNO60934 754 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 FRMD6-AS1P0C7T7 363 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 DNAH10OSP0CZ25 163 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 PRG2P13727 222 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 MCM2P49736 904 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 TRA2BP62995 288 aaKnown RBP1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 EEF1A1P68104 462 aaKnown RBP1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 CSNK2A1P68400 391 aaPredicted RBP1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 COX10Q12887 443 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 GAGE5Q13069 117 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 GAGE6Q13070 117 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 ITGA9Q13797 1035 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 KIAA1644Q3SXP7 199 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 SLC9B1Q4ZJI4 515 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 WDR45BQ5MNZ6 344 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 EEF1A1P5Q5VTE0 462 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 GGNBP1Q5YKI7 109 aa1.32□□□□□ -2.2
RNU2-55P-201ENST00000411146 TTI2Q6NXR4 508 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms