RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 KCTD3Q9Y597 815 aa18.02■□□□□ 0.48
PAX3-208ENST00000409828 GOLGA8CPA6NN73 597 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 GAPDHSO14556 408 aaPredicted RBP18.01■□□□□ 0.47
PAX3-208ENST00000409828 RPL21P46778 160 aaKnown RBP18.01■□□□□ 0.47
PAX3-208ENST00000409828 CCT8P50990 548 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 HNRNPKP61978 463 aaKnown RBP eCLIP18.01■□□□□ 0.47
PAX3-208ENST00000409828 SEPT6Q14141 434 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 GPR33Q49SQ1 333 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 TPRG1LQ5T0D9 272 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 C8orf74Q6P047 294 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 DBX2Q6ZNG2 339 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 SDR16C5Q8N3Y7 309 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 OR56A4Q8NGH8 313 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 OR13C4Q8NGS5 318 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 ZNF398Q8TD17 642 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 SEC14L1Q92503 715 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 LGR4Q9BXB1 951 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 RMI1Q9H9A7 625 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 SOX13Q9UN79 622 aa18.01■□□□□ 0.47
PAX3-208ENST00000409828 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.01■□□□□ 0.47
PAX3-208ENST00000409828 FAM237BA0A1B0GVD1 139 aa18■□□□□ 0.47
PAX3-208ENST00000409828 H3BM21 787 aa18■□□□□ 0.47
PAX3-208ENST00000409828 TP73O15350 636 aa18■□□□□ 0.47
PAX3-208ENST00000409828 BUD23O43709 281 aaKnown RBP18■□□□□ 0.47
PAX3-208ENST00000409828 SRP72O76094 671 aaKnown RBP18■□□□□ 0.47
PAX3-208ENST00000409828 PRAMEF1O95521 474 aa18■□□□□ 0.47
PAX3-208ENST00000409828 CAV1Q03135 178 aa18■□□□□ 0.47
PAX3-208ENST00000409828 PPARDQ03181 441 aa18■□□□□ 0.47
PAX3-208ENST00000409828 CALCOCO2Q13137 446 aa18■□□□□ 0.47
PAX3-208ENST00000409828 EIF2B5Q13144 721 aaKnown RBP18■□□□□ 0.47
PAX3-208ENST00000409828 PEX6Q13608 980 aa18■□□□□ 0.47
PAX3-208ENST00000409828 SUZ12Q15022 739 aaKnown RBP18■□□□□ 0.47
PAX3-208ENST00000409828 CHRNA6Q15825 494 aa18■□□□□ 0.47
PAX3-208ENST00000409828 KCTD19Q17RG1 926 aaPredicted RBP18■□□□□ 0.47
PAX3-208ENST00000409828 ATP13A5Q4VNC0 1218 aa18■□□□□ 0.47
PAX3-208ENST00000409828 ALS2CLQ60I27 953 aa18■□□□□ 0.47
PAX3-208ENST00000409828 ENPP7Q6UWV6 458 aa18■□□□□ 0.47
PAX3-208ENST00000409828 FAM151BQ6UXP7 276 aa18■□□□□ 0.47
PAX3-208ENST00000409828 SNX20Q7Z614 316 aa18■□□□□ 0.47
PAX3-208ENST00000409828 PHYKPLQ8IUZ5 450 aa18■□□□□ 0.47
PAX3-208ENST00000409828 PDIK1LQ8N165 341 aa18■□□□□ 0.47
PAX3-208ENST00000409828 OR13J1Q8NGT2 312 aa18■□□□□ 0.47
PAX3-208ENST00000409828 NETO1Q8TDF5 533 aa18■□□□□ 0.47
PAX3-208ENST00000409828 LRRC39Q96DD0 335 aa18■□□□□ 0.47
PAX3-208ENST00000409828 DNAJC1Q96KC8 554 aaKnown RBP18■□□□□ 0.47
PAX3-208ENST00000409828 SIGLEC10Q96LC7 697 aa18■□□□□ 0.47
PAX3-208ENST00000409828 NAT9Q9BTE0 207 aa18■□□□□ 0.47
PAX3-208ENST00000409828 GTPBP2Q9BX10 602 aaKnown RBP18■□□□□ 0.47
PAX3-208ENST00000409828 TRIM39Q9HCM9 518 aa18■□□□□ 0.47
PAX3-208ENST00000409828 TREX1Q9NSU2 369 aa18■□□□□ 0.47
PAX3-208ENST00000409828 FKBPLQ9UIM3 349 aa18■□□□□ 0.47
PAX3-208ENST00000409828 ANAPC5Q9UJX4 755 aa18■□□□□ 0.47
PAX3-208ENST00000409828 TMEM202A6NGA9 273 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 VEGFDO43915 354 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 SLC25A14O95258 325 aaPredicted RBP17.99■□□□□ 0.47
PAX3-208ENST00000409828 RASGRP1O95267 797 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 CEACAM5P06731 702 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 IVLP07476 585 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 ITGALP20701 1170 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 MGAT1P26572 445 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 HK3P52790 923 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 ITGA8P53708 1063 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 SRP54P61011 504 aaKnown RBP17.99■□□□□ 0.47
PAX3-208ENST00000409828 NFATC2Q13469 925 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 PTPRCAPQ14761 206 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 CCDC38Q502W7 563 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 LDLRAP1Q5SW96 308 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 KDM7AQ6ZMT4 941 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 CCNJLQ8IV13 435 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 DDHD1Q8NEL9 900 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 HEXDCQ8WVB3 486 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 ULK4Q96C45 1275 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 FAM129AQ9BZQ8 928 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 PHACTR1Q9C0D0 580 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 ASB8Q9H765 288 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 FSCN3Q9NQT6 498 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 CHRAC1Q9NRG0 131 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 TM7SF3Q9NS93 570 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 RXFP3Q9NSD7 469 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 KLQ9UEF7 1012 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 FNDC3AQ9Y2H6 1198 aaKnown RBP17.99■□□□□ 0.47
PAX3-208ENST00000409828 SNX24Q9Y343 169 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 CSNK1G3Q9Y6M4 447 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 SLC30A1Q9Y6M5 507 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 PCNX2A6NKB5 2137 aa17.99■□□□□ 0.47
PAX3-208ENST00000409828 ZFC3H1O60293 1989 aaKnown RBP17.99■□□□□ 0.47
PAX3-208ENST00000409828 GOLGA4Q13439 2230 aaKnown RBP17.98■□□□□ 0.47
PAX3-208ENST00000409828 TRBV5-4A0A0C4DH59 114 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 BHMG1C9JSJ3 638 aaPredicted RBP17.98■□□□□ 0.47
PAX3-208ENST00000409828 GOLGA8MH3BSY2 632 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 AVILO75366 819 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 SDHBP21912 280 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 EPHA8P29322 1005 aaPredicted RBP17.98■□□□□ 0.47
PAX3-208ENST00000409828 MC4RP32245 332 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 CACNG1Q06432 222 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 SHBQ15464 509 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 ALG11Q2TAA5 492 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 DNAJC21Q5F1R6 531 aaKnown RBP17.98■□□□□ 0.47
PAX3-208ENST00000409828 STPG1Q5TH74 334 aa17.98■□□□□ 0.47
PAX3-208ENST00000409828 TMEM135Q86UB9 458 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms