RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 RNF112Q9ULX5 631 aa20■□□□□ 0.79
USP39-204ENST00000409766 WASF2Q9Y6W5 498 aa20■□□□□ 0.79
USP39-204ENST00000409766 ZBBXA8MT70 800 aa20■□□□□ 0.79
USP39-204ENST00000409766 CDC7O00311 574 aa20■□□□□ 0.79
USP39-204ENST00000409766 GPR39O43194 453 aa20■□□□□ 0.79
USP39-204ENST00000409766 CDK14O94921 469 aa20■□□□□ 0.79
USP39-204ENST00000409766 FGF4P08620 206 aa20■□□□□ 0.79
USP39-204ENST00000409766 GFAPP14136 432 aa20■□□□□ 0.79
USP39-204ENST00000409766 ARSAP15289 507 aa20■□□□□ 0.79
USP39-204ENST00000409766 ERFP50548 548 aa20■□□□□ 0.79
USP39-204ENST00000409766 BCL2L1Q07817 233 aa20■□□□□ 0.79
USP39-204ENST00000409766 TSNQ15631 228 aaKnown RBP20■□□□□ 0.79
USP39-204ENST00000409766 ZRSR2Q15696 482 aaKnown RBP20■□□□□ 0.79
USP39-204ENST00000409766 PPP1R3AQ16821 1122 aa20■□□□□ 0.79
USP39-204ENST00000409766 TAS2R42Q7RTR8 314 aa20■□□□□ 0.79
USP39-204ENST00000409766 HPS6Q86YV9 775 aa20■□□□□ 0.79
USP39-204ENST00000409766 DSELQ8IZU8 1212 aa20■□□□□ 0.79
USP39-204ENST00000409766 CLYBLQ8N0X4 340 aa20■□□□□ 0.79
USP39-204ENST00000409766 SIDT2Q8NBJ9 832 aaKnown RBP20■□□□□ 0.79
USP39-204ENST00000409766 GIMAP7Q8NHV1 300 aa20■□□□□ 0.79
USP39-204ENST00000409766 CD200R1Q8TD46 325 aa20■□□□□ 0.79
USP39-204ENST00000409766 RCN3Q96D15 328 aa20■□□□□ 0.79
USP39-204ENST00000409766 SMG9Q9H0W8 520 aaKnown RBP20■□□□□ 0.79
USP39-204ENST00000409766 MRGBPQ9NV56 204 aa20■□□□□ 0.79
USP39-204ENST00000409766 POMPQ9Y244 141 aa20■□□□□ 0.79
USP39-204ENST00000409766 COMMD10Q9Y6G5 202 aa20■□□□□ 0.79
USP39-204ENST00000409766 PPP6CO00743 305 aa19.99■□□□□ 0.79
USP39-204ENST00000409766 ECI2O75521 394 aa19.99■□□□□ 0.79
USP39-204ENST00000409766 ESR1P03372 595 aa19.99■□□□□ 0.79
USP39-204ENST00000409766 BMP1P13497 986 aa19.99■□□□□ 0.79
USP39-204ENST00000409766 PFKLP17858 780 aa19.99■□□□□ 0.79
USP39-204ENST00000409766 MAPK8P45983 427 aa19.99■□□□□ 0.79
USP39-204ENST00000409766 FAM219BQ5XKK7 198 aa19.99■□□□□ 0.79
USP39-204ENST00000409766 C16orf89Q6UX73 402 aa19.99■□□□□ 0.79
USP39-204ENST00000409766 LRRC74BQ6ZQY2 392 aa19.99■□□□□ 0.79
USP39-204ENST00000409766 SLC22A17Q8WUG5 538 aa19.99■□□□□ 0.79
USP39-204ENST00000409766 RSRC1Q96IZ7 334 aaKnown RBP19.99■□□□□ 0.79
USP39-204ENST00000409766 GCNAQ96QF7 691 aa19.99■□□□□ 0.79
USP39-204ENST00000409766 P2RY12Q9H244 342 aa19.99■□□□□ 0.79
USP39-204ENST00000409766 ASAH2Q9NR71 780 aa19.99■□□□□ 0.79
USP39-204ENST00000409766 TRMT6Q9UJA5 497 aaKnown RBP19.99■□□□□ 0.79
USP39-204ENST00000409766 PRPF19Q9UMS4 504 aaKnown RBP19.99■□□□□ 0.79
USP39-204ENST00000409766 SCN8AQ9UQD0 1980 aa19.99■□□□□ 0.79
USP39-204ENST00000409766 A0A0J9YYE9 177 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 SUPT3HB4E1H0 165 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 CLASP2O75122 1294 aaKnown RBP19.98■□□□□ 0.79
USP39-204ENST00000409766 SOCS5O75159 536 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 FKBP6O75344 327 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 SUPT3HO75486 399 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 TRBC1P01850 177 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 GKP32189 559 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 CCR2P41597 374 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 AP2B1P63010 937 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 TAF11Q15544 211 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 DGKKQ5KSL6 1271 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 LARP4Q71RC2 724 aaKnown RBP eCLIP19.98■□□□□ 0.79
USP39-204ENST00000409766 METTL3Q86U44 580 aaKnown RBP19.98■□□□□ 0.79
USP39-204ENST00000409766 STK40Q8N2I9 435 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 FBXO39Q8N4B4 442 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 EFCAB3Q8N7B9 438 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 CCDC124Q96CT7 223 aaKnown RBP19.98■□□□□ 0.79
USP39-204ENST00000409766 LMLNQ96KR4 655 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 NSUN5Q96P11 429 aaKnown RBP19.98■□□□□ 0.79
USP39-204ENST00000409766 SLC30A1Q9Y6M5 507 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 MTCL1Q9Y4B5 1905 aaKnown RBP19.98■□□□□ 0.79
USP39-204ENST00000409766 SYCE1LA8MT33 242 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 UBDO15205 165 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 CCL16O15467 120 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 ANPEPP15144 967 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 ERVFC1P60507 584 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 IL2P60568 153 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 CCNIQ14094 377 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 CDKN3Q16667 212 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 AAGABQ6PD74 315 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 HMGCLL1Q8TB92 370 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 EEF1AKMT1Q8WVE0 214 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 C19orf43Q9BQ61 176 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 TCF25Q9BQ70 676 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 ZFYVE1Q9HBF4 777 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 HCFC1R1Q9NWW0 138 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 NMRK1Q9NWW6 199 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 ANGPTL2Q9UKU9 493 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 DNAJC15Q9Y5T4 150 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 IRAK3Q9Y616 596 aa19.98■□□□□ 0.79
USP39-204ENST00000409766 ZNF106Q9H2Y7 1883 aaKnown RBP19.98■□□□□ 0.79
USP39-204ENST00000409766 NPEPPSL1A6NEC2 478 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 BTN3A1O00481 513 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 GAPDHSO14556 408 aaPredicted RBP19.97■□□□□ 0.79
USP39-204ENST00000409766 KLK8O60259 260 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 CHRM3P20309 590 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 EEF1DP29692 281 aaKnown RBP19.97■□□□□ 0.79
USP39-204ENST00000409766 SQLEQ14534 574 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 CERS6Q6ZMG9 384 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 NECAB2Q7Z6G3 386 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 CMTM8Q8IZV2 173 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 GRIN3AQ8TCU5 1115 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 VOPP1Q96AW1 172 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 C19orf60Q96EN9 201 aa19.97■□□□□ 0.79
USP39-204ENST00000409766 NAF1Q96HR8 494 aaKnown RBP19.97■□□□□ 0.79
USP39-204ENST00000409766 C3orf30Q96M34 536 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms