RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 UCKL1Q9NWZ5 548 aa20.15■□□□□ 0.82
PTCD3-202ENST00000409326 SPASTQ9UBP0 616 aa20.15■□□□□ 0.82
PTCD3-202ENST00000409326 FKBPLQ9UIM3 349 aa20.15■□□□□ 0.82
PTCD3-202ENST00000409326 BTBD3Q9Y2F9 522 aa20.15■□□□□ 0.82
PTCD3-202ENST00000409326 HEATR9A2RTY3 570 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 MROH6A6NGR9 719 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 TNFP01375 233 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 CSRP1P21291 193 aaKnown RBP20.14■□□□□ 0.81
PTCD3-202ENST00000409326 TERF1P54274 439 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 LAMB3Q13751 1172 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 ITGA9Q13797 1035 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 DHX34Q14147 1143 aaKnown RBP20.14■□□□□ 0.81
PTCD3-202ENST00000409326 PUM1Q14671 1186 aaKnown RBP eCLIP20.14■□□□□ 0.81
PTCD3-202ENST00000409326 CHRNA6Q15825 494 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 ATP13A5Q4VNC0 1218 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 ANKRD22Q5VYY1 191 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 LRRC8BQ6P9F7 803 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 DOK6Q6PKX4 331 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 ZNF572Q7Z3I7 529 aaPredicted RBP20.14■□□□□ 0.81
PTCD3-202ENST00000409326 PHYKPLQ8IUZ5 450 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 SLC25A45Q8N413 288 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 SETD7Q8WTS6 366 aaKnown RBP20.14■□□□□ 0.81
PTCD3-202ENST00000409326 STYXQ8WUJ0 223 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 SCARF2Q96GP6 870 aaPredicted RBP20.14■□□□□ 0.81
PTCD3-202ENST00000409326 DNAJC1Q96KC8 554 aaKnown RBP20.14■□□□□ 0.81
PTCD3-202ENST00000409326 CYP4F12Q9HCS2 524 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 VPS18Q9P253 973 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 ASIC3Q9UHC3 531 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 CDC23Q9UJX2 597 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 APPL1Q9UKG1 709 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 PCOLCE2Q9UKZ9 415 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 OAS3Q9Y6K5 1087 aaKnown RBP20.14■□□□□ 0.81
PTCD3-202ENST00000409326 CSNK1G3Q9Y6M4 447 aa20.14■□□□□ 0.81
PTCD3-202ENST00000409326 GOLGA4Q13439 2230 aaKnown RBP20.14■□□□□ 0.81
PTCD3-202ENST00000409326 ARHGEF17Q96PE2 2063 aaPredicted RBP20.14■□□□□ 0.81
PTCD3-202ENST00000409326 AQP9O43315 295 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 URI1O94763 535 aaPredicted RBP20.13■□□□□ 0.81
PTCD3-202ENST00000409326 TMEM63AO94886 807 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 PRAMEF1O95521 474 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 IVLP07476 585 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 ADRA1DP25100 572 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 PSMA3P25788 255 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 ID4P47928 161 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 SARNPP82979 210 aaKnown RBP20.13■□□□□ 0.81
PTCD3-202ENST00000409326 CCDC38Q502W7 563 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 PRRT3Q5FWE3 981 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 RD3Q7Z3Z2 195 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 JAMLQ86YT9 394 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 FSTL5Q8N475 847 aaPredicted RBP20.13■□□□□ 0.81
PTCD3-202ENST00000409326 BAHD1Q8TBE0 780 aaPredicted RBP20.13■□□□□ 0.81
PTCD3-202ENST00000409326 LMX1AQ8TE12 382 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 ZNF592Q92610 1267 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 CAMK1GQ96NX5 476 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 KRT12Q99456 494 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 SLC32A1Q9H598 525 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 NLE1Q9NVX2 485 aaPredicted RBP20.13■□□□□ 0.81
PTCD3-202ENST00000409326 SMOXQ9NWM0 555 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 MOSPD1Q9UJG1 213 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 TMPRSS11EQ9UL52 423 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 SUFUQ9UMX1 484 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 TMEM98Q9Y2Y6 226 aa20.13■□□□□ 0.81
PTCD3-202ENST00000409326 NEMP2A6NFY4 417 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 H7C0S8 307 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 SCAMP1O15126 338 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 CBFA2T3O75081 653 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 SRP72O76094 671 aaKnown RBP20.12■□□□□ 0.81
PTCD3-202ENST00000409326 SLC25A14O95258 325 aaPredicted RBP20.12■□□□□ 0.81
PTCD3-202ENST00000409326 FUCA1P04066 466 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 CTSEP14091 401 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 ADCY8P40145 1251 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 POLD2P49005 469 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 SESN2P58004 480 aaPredicted RBP20.12■□□□□ 0.81
PTCD3-202ENST00000409326 TMPRSS15P98073 1019 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 XIAPP98170 497 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 CKAP4Q07065 602 aaKnown RBP20.12■□□□□ 0.81
PTCD3-202ENST00000409326 PEX6Q13608 980 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 PPIL6Q8IXY8 311 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 NAT8LQ8N9F0 302 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 MCUQ8NE86 351 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 DEFB124Q8NES8 71 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 RHBDD1Q8TEB9 315 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 PTCD2Q8WV60 388 aaKnown RBP20.12■□□□□ 0.81
PTCD3-202ENST00000409326 IL22Q9GZX6 179 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 CARS2Q9HA77 564 aaKnown RBP20.12■□□□□ 0.81
PTCD3-202ENST00000409326 BFARQ9NZS9 450 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 RIMKLBQ9ULI2 386 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 TCAF1Q9Y4C2 921 aa20.12■□□□□ 0.81
PTCD3-202ENST00000409326 DCDC2BA2VCK2 349 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 DNALI1O14645 258 aaPredicted RBP20.11■□□□□ 0.81
PTCD3-202ENST00000409326 TTI1O43156 1089 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 GPR39O43194 453 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 ASMTLO95671 621 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 GIMD1P0DJR0 217 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 NPY2RP49146 381 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 C2orf54Q08AI8 447 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 C1orf61Q13536 156 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 ELOCQ15369 112 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 SKIDA1Q1XH10 827 aa20.11■□□□□ 0.81
PTCD3-202ENST00000409326 RNASEH2BQ5TBB1 312 aaKnown RBP20.11■□□□□ 0.81
PTCD3-202ENST00000409326 NLRP9Q7RTR0 991 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms