RNA–Protein interactions for RNA: ENST00000409204.4

PCDH20-201, Transcript of protocadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH20, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20-201ENST00000409204 DSELQ8IZU8 1212 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 RTL3Q8N8U3 475 aaKnown RBP12.09□□□□□ -0.47
PCDH20-201ENST00000409204 AP2M1Q96CW1 435 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 PANX1Q96RD7 426 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 GRHL1Q9NZI5 618 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 GNEQ9Y223 722 aaKnown RBP12.09□□□□□ -0.47
PCDH20-201ENST00000409204 SLC9A8Q9Y2E8 581 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 ATP6AP2A0A1C7CYW4 349 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 PIRO00625 290 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 ATP6AP2O75787 350 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 GDF10P55107 478 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 SOX4Q06945 474 aaPredicted RBP12.09□□□□□ -0.47
PCDH20-201ENST00000409204 CYP1B1Q16678 543 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 FAM182AQ5T1J6 154 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 ZC3H7AQ8IWR0 971 aaKnown RBP12.09□□□□□ -0.47
PCDH20-201ENST00000409204 BHLHE22Q8NFJ8 381 aaPredicted RBP12.09□□□□□ -0.47
PCDH20-201ENST00000409204 OR7D4Q8NG98 312 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 ANKRD49Q8WVL7 239 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 TRIT1Q9H3H1 467 aaKnown RBP12.09□□□□□ -0.47
PCDH20-201ENST00000409204 VPS4AQ9UN37 437 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 TRAF6Q9Y4K3 522 aa12.09□□□□□ -0.47
PCDH20-201ENST00000409204 RBM47A0AV96 593 aaKnown RBP12.08□□□□□ -0.48
PCDH20-201ENST00000409204 TRIM38O00635 465 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 STX11O75558 287 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 RNASEH2AO75792 299 aaKnown RBP12.08□□□□□ -0.48
PCDH20-201ENST00000409204 EDN1P05305 212 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 STX4Q12846 297 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 BNIP2Q12982 314 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 HECTD2Q5U5R9 776 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 NEK10Q6ZWH5 1172 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 SPATA6LQ8N4H0 392 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 ARL14EPQ8N8R7 260 aaPredicted RBP12.08□□□□□ -0.48
PCDH20-201ENST00000409204 ZNF296Q8WUU4 475 aaPredicted RBP12.08□□□□□ -0.48
PCDH20-201ENST00000409204 AIF1LQ9BQI0 150 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 DDX60LQ5H9U9 1706 aaKnown RBP12.08□□□□□ -0.48
PCDH20-201ENST00000409204 PDE9AO76083 593 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 UNC5CO95185 931 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 DLGAP3O95886 979 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 EPHA3P29320 983 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 GRIA3P42263 894 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 SSR2P43308 183 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 ERVK-21P61565 698 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 CACNG1Q06432 222 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 IL10RBQ08334 325 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 ALG11Q2TAA5 492 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 TPGS2Q68CL5 300 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 CCDC103Q8IW40 242 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 PPP1R14AQ96A00 147 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 SUSD3Q96L08 255 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 TCF25Q9BQ70 676 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 TTLL2Q9BWV7 592 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 DNAJC11Q9NVH1 559 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 DUS2Q9NX74 493 aaKnown RBP12.08□□□□□ -0.48
PCDH20-201ENST00000409204 TRIM24O15164 1050 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 SERPINB7O75635 380 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 BPGMP07738 259 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 SERPINA6P08185 405 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 ACRP10323 421 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 PROZP22891 400 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 ITGA1P56199 1179 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 SLC25A3Q00325 362 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 DSC2Q02487 901 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 TNK2Q07912 1038 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 OLFML1Q6UWY5 402 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 HFE2Q6ZVN8 426 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 C10orf107Q8IVU9 208 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 OR52L1Q8NGH7 329 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 CENPIQ92674 756 aaPredicted RBP12.08□□□□□ -0.48
PCDH20-201ENST00000409204 MARK4Q96L34 752 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 SLITRK2Q9H156 845 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 UNC93B1Q9H1C4 597 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 VRTNQ9H8Y1 702 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 UBR3Q6ZT12 1888 aa12.08□□□□□ -0.48
PCDH20-201ENST00000409204 A0A087WXM4 84 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 SMIM31A0A1B0GVY4 71 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 SLC38A8A6NNN8 435 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 RFXANKO14593 260 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 WASP42768 502 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 NRLP54845 237 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 CAP1Q01518 475 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 GAD2Q05329 585 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 TOMM20Q15388 145 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 GPAT3Q53EU6 434 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 CTU1Q7Z7A3 348 aaKnown RBP12.07□□□□□ -0.48
PCDH20-201ENST00000409204 ULK2Q8IYT8 1036 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 SRFBP1Q8NEF9 429 aaKnown RBP12.07□□□□□ -0.48
PCDH20-201ENST00000409204 ARAP2Q8WZ64 1704 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 ITCHQ96J02 903 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 TBATAQ96M53 351 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 HEPHQ9BQS7 1158 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 COL5A3P25940 1745 aaPredicted RBP12.07□□□□□ -0.48
PCDH20-201ENST00000409204 FAM25AB3EWG3 89 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 FAM25CB3EWG5 89 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 FAM25GB3EWG6 89 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 PTGES3LE9PB15 166 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 PER2O15055 1255 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 PSMD8P48556 350 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 IDH2P48735 452 aaKnown RBP12.07□□□□□ -0.48
PCDH20-201ENST00000409204 ZNF132P52740 706 aa12.07□□□□□ -0.48
PCDH20-201ENST00000409204 CDC42P60953 191 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms