RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 C4orf46Q504U0 113 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 ARMC10Q8N2F6 343 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 CXorf40AQ8TE69 158 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 HSFY1Q96LI6 401 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 GRHL1Q9NZI5 618 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 ENDOD1O94919 500 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 ASLP04424 464 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 EPHA3P29320 983 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 CBLBQ13191 982 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 EIPR1Q53HC9 387 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 DCST1Q5T197 706 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 CXorf57Q6NSI4 855 aaKnown RBP12.1□□□□□ -0.47
SHANK2-203ENST00000409161 ADGRG6Q86SQ4 1221 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 FAM71AQ8IYT1 594 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 OR52K1Q8NGK4 314 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 PTPRHQ9HD43 1115 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 C14orf105Q9NVL8 296 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 FBXO9Q9UK97 447 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-203ENST00000409161 TNFSF13BQ9Y275 285 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 TMX2Q9Y320 296 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 IFNW1P05000 195 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 FSHRP23945 695 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 ACSL1P33121 698 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 ATP5C1P36542 298 aaKnown RBP12.1□□□□□ -0.47
SHANK2-203ENST00000409161 RPS9P46781 194 aaKnown RBP12.1□□□□□ -0.47
SHANK2-203ENST00000409161 SEPHS1P49903 392 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 LAPTM5Q13571 262 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 SMU1Q2TAY7 513 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 RBM48Q5RL73 367 aaKnown RBP12.1□□□□□ -0.47
SHANK2-203ENST00000409161 OR2L3Q8NG85 312 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 OR5T3Q8NGG3 340 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 SLC2A14Q8TDB8 520 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 SNX33Q8WV41 574 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 TAS2R1Q9NYW7 299 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 H6PDO95479 791 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 USP17L7P0C7H9 530 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 UROSP10746 265 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 LHFPL3Q86UP9 236 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 SDR16C5Q8N3Y7 309 aa12.1□□□□□ -0.47
SHANK2-203ENST00000409161 TCRBV9S1A1TA0A576 114 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 KAT7O95251 611 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 PVALBP20472 110 aaPredicted RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 GRSF1Q12849 480 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 RAPSNQ13702 412 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 FAM76BQ5HYJ3 339 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 OR52K2Q8NGK3 314 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 CREB3L1Q96BA8 519 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 PCDHB1Q9Y5F3 818 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 CHRNA5P30532 468 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 SPATS1Q496A3 300 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 LACTB2Q53H82 288 aaPredicted RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 MPP5Q8N3R9 675 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 ZNF563Q8TA94 476 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 KCTD15Q96SI1 283 aaPredicted RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 SPATA9Q9BWV2 254 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 RIOX1Q9H6W3 641 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 DNAAF2Q9NVR5 837 aaKnown RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 DGKBQ9Y6T7 804 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 TRAV19A0A0A6YYK7 116 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 PRKD3O94806 890 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 SCELO95171 688 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 TOP3BO95985 862 aaKnown RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 SHBGP04278 402 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 ZNF311Q5JNZ3 666 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 LLGL2Q6P1M3 1020 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 GLB1L3Q8NCI6 653 aaPredicted RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 C11orf65Q8NCR3 313 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 GFM1Q96RP9 751 aaKnown RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 GPATCH1Q9BRR8 931 aaKnown RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 EDF1O60869 148 aaKnown RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 PSKH1P11801 424 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 DNASE1L1P49184 302 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 FAM91A1Q658Y4 838 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 TRABD2AQ86V40 505 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 AMIGO1Q86WK6 493 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 OR4C6Q8NH72 309 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 TPK1Q9H3S4 243 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 VTNP04004 478 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 HSPA14Q0VDF9 509 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 ABCA11PQ4W5N1 156 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 CES3Q6UWW8 571 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 CPNE9Q8IYJ1 553 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 C9orf43Q8TAL5 461 aaPredicted RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 OMDQ99983 421 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 TMEM27Q9HBJ8 222 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 KCNQ5Q9NR82 932 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 RABL2AQ9UBK7 228 aaPredicted RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 RABL2BQ9UNT1 228 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 TRPV2Q9Y5S1 764 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 NFASCO94856 1347 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 USP31Q70CQ4 1352 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 ITGA10O75578 1167 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 TIPRLO75663 272 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 ALYREFQ86V81 257 aaKnown RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 OR4L1Q8NH43 312 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 YTHDF1Q9BYJ9 559 aaKnown RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 THUMPD1Q9NXG2 353 aaKnown RBP12.09□□□□□ -0.47
SHANK2-203ENST00000409161 PCDHGB6Q9Y5F9 930 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 PCDHGB2Q9Y5G2 931 aa12.09□□□□□ -0.47
SHANK2-203ENST00000409161 SALL1Q9NSC2 1324 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms