RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 SPHK2Q9NRA0 654 aa24.52■■□□□ 1.52
DNMT3A-206ENST00000406659 LOC100653049A0A140TA62 436 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 CAPN8A6NHC0 703 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 GOLGA8CPA6NN73 597 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 SUPT3HB4E1H0 165 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 C5orf67F2Z3F1 127 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 SUPT3HO75486 399 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 KRT34O76011 436 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 CPOXP36551 454 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 ZNF697Q5TEC3 545 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 UGT3A1Q6NUS8 523 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 SPRED2Q7Z698 418 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 CPSF7Q8N684 471 aaKnown RBP24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 KCNJ9Q92806 393 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 FAM161BQ96MY7 647 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 SLC30A3Q99726 388 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 APPL1Q9UKG1 709 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 L3MBTL1Q9Y468 752 aa24.51■■□□□ 1.51
DNMT3A-206ENST00000406659 SYCE1LA8MT33 242 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 SDHDO14521 159 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 SLC22A2O15244 555 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 PEX11AO75192 247 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 TM7SF2O76062 418 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 LMNAP02545 664 aaKnown RBP24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 TYRP14679 529 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 GM2AP17900 193 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 IL2P60568 153 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 SATB1Q01826 763 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 BTKQ06187 659 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 E2F5Q15329 346 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 ZNF77Q15935 545 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 GRASPQ7Z6J2 395 aaPredicted RBP24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 PCDH20Q8N6Y1 951 aaKnown RBP24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 CEP70Q8NHQ1 597 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 CATSPER2Q96P56 530 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 ASB2Q96Q27 587 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 CEP44Q9C0F1 390 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 P2RY12Q9H244 342 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 RNPEPL1Q9HAU8 725 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 SARS2Q9NP81 518 aaKnown RBP24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 TRAF6Q9Y4K3 522 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 PCDHB1Q9Y5F3 818 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 SEC23IPQ9Y6Y8 1000 aaKnown RBP24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 GBF1Q92538 1859 aa24.5■■□□□ 1.51
DNMT3A-206ENST00000406659 PRMT5O14744 637 aaPredicted RBP24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 ENTPD5O75356 428 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 SKAP2O75563 359 aaPredicted RBP24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 CIB2O75838 187 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 PRAMEF1O95521 474 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 RB1P06400 928 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 MTHFD2P13995 350 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 ITGALP20701 1170 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 PIK3R1P27986 724 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 SLC25A3Q00325 362 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 ECT2LQ008S8 904 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 CAMK1Q14012 370 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 TSNQ15631 228 aaKnown RBP24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 CDKN3Q16667 212 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 CARD16Q5EG05 197 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 PRSS36Q5K4E3 855 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 SERPINA9Q86WD7 417 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 MAELQ96JY0 434 aaKnown RBP24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 SUV39H2Q9H5I1 410 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 TNFRSF12AQ9NP84 129 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 ALPK3Q96L96 1907 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 MYOFQ9NZM1 2061 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 NPEPPSL1A6NEC2 478 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 CDC7O00311 574 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 BTN3A1O00481 513 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 ZNF197O14709 1029 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 GPR39O43194 453 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 POP4O95707 220 aaKnown RBP24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 THRAP10827 490 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 BMP1P13497 986 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 ZNF7P17097 686 aaPredicted RBP24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 TSPAN8P19075 237 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 ADSLP30566 484 aaPredicted RBP24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 DMC1Q14565 340 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 KPNB1Q14974 876 aaKnown RBP24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 LY6G5CQ5SRR4 150 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 GRAMD4Q6IC98 578 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 ELMSAN1Q6PJG2 1045 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 SNX20Q7Z614 316 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 ZSWIM9Q86XI8 627 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 FBXO39Q8N4B4 442 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 CD200R1Q8TD46 325 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 LINGO1Q96FE5 620 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 ZSWIM3Q96MP5 696 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 LENG8Q96PV6 779 aaPredicted RBP24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 CPEB1Q9BZB8 566 aaKnown RBP24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 CLPBQ9H078 707 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 ASB8Q9H765 288 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 ZMYM5Q9UJ78 669 aa24.49■■□□□ 1.51
DNMT3A-206ENST00000406659 A8MX80 341 aa24.48■■□□□ 1.51
DNMT3A-206ENST00000406659 UBFD1O14562 309 aaKnown RBP24.48■■□□□ 1.51
DNMT3A-206ENST00000406659 ECI2O75521 394 aa24.48■■□□□ 1.51
DNMT3A-206ENST00000406659 MYOGP15173 224 aa24.48■■□□□ 1.51
DNMT3A-206ENST00000406659 CUL3Q13618 768 aa24.48■■□□□ 1.51
DNMT3A-206ENST00000406659 LYPLAL1Q5VWZ2 237 aa24.48■■□□□ 1.51
DNMT3A-206ENST00000406659 TMEM198Q66K66 360 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms