RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PRAMEF1O95521 474 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 APOA4P06727 396 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 HLA-EP13747 358 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 TIMP2P16035 220 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 ITGB7P26010 798 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 MAGEA9P43362 315 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 SEC24CP53992 1094 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 TAS2R39P59534 338 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 MTAPQ13126 283 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 ANGPT1Q15389 498 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 TSNAXIP1Q2TAA8 658 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 GPR33Q49SQ1 333 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 N4BP2L1Q5TBK1 243 aaPredicted RBP20.89■□□□□ 0.94
TPM1-208ENST00000404484 SNX20Q7Z614 316 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 TSPAN33Q86UF1 283 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 ARMC2Q8NEN0 867 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 ACVR1CQ8NER5 493 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 LPGAT1Q92604 370 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 CHRDQ9H2X0 955 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 POPDC3Q9HBV1 291 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 SPATA6Q9NWH7 488 aaPredicted RBP20.89■□□□□ 0.94
TPM1-208ENST00000404484 FNDC3AQ9Y2H6 1198 aaKnown RBP20.89■□□□□ 0.94
TPM1-208ENST00000404484 VPS13AQ96RL7 3174 aa20.89■□□□□ 0.94
TPM1-208ENST00000404484 ATG2BQ96BY7 2078 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 TCP11X1B4DZS4 312 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 NDUFAB1O14561 156 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 BIRC5O15392 142 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 PHGDHO43175 533 aaKnown RBP20.89■□□□□ 0.93
TPM1-208ENST00000404484 SLC35E2BP0CK96 405 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 NEFHP12036 1026 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 BPIP17213 487 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 IL12RB1P42701 662 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 PTGER3P43115 390 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 GRSF1Q12849 480 aaKnown RBP eCLIP20.89■□□□□ 0.93
TPM1-208ENST00000404484 GAS6Q14393 721 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 RBM20Q5T481 1227 aaKnown RBP20.89■□□□□ 0.93
TPM1-208ENST00000404484 FAM151BQ6UXP7 276 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 TAS2R42Q7RTR8 314 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 CPLX4Q7Z7G2 160 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 TBC1D1Q86TI0 1168 aaPredicted RBP20.89■□□□□ 0.93
TPM1-208ENST00000404484 TTC7BQ86TV6 843 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 MAML2Q8IZL2 1156 aaPredicted RBP20.89■□□□□ 0.93
TPM1-208ENST00000404484 CCDC63Q8NA47 563 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 PIP4K2CQ8TBX8 421 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 PLEKHG4BQ96PX9 1271 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 CCT8L2Q96SF2 557 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 NDNQ99608 321 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 AARSD1Q9BTE6 412 aaKnown RBP20.89■□□□□ 0.93
TPM1-208ENST00000404484 PCDH12Q9NPG4 1184 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 DYRK4Q9NR20 520 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 PPM1HQ9ULR3 514 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 CRYL1Q9Y2S2 319 aa20.89■□□□□ 0.93
TPM1-208ENST00000404484 ZNF106Q9H2Y7 1883 aaKnown RBP20.89■□□□□ 0.93
TPM1-208ENST00000404484 SCN8AQ9UQD0 1980 aa20.88■□□□□ 0.93
TPM1-208ENST00000404484 MYO15AQ9UKN7 3530 aa20.88■□□□□ 0.93
TPM1-208ENST00000404484 UBA6A0AVT1 1052 aaPredicted RBP20.88■□□□□ 0.93
TPM1-208ENST00000404484 GOLGA8CPA6NN73 597 aa20.88■□□□□ 0.93
TPM1-208ENST00000404484 PLIN3O60664 434 aa20.88■□□□□ 0.93
TPM1-208ENST00000404484 EPHX1P07099 455 aa20.88■□□□□ 0.93
TPM1-208ENST00000404484 LHCGRP22888 699 aa20.88■□□□□ 0.93
TPM1-208ENST00000404484 SLC26A3P40879 764 aa20.88■□□□□ 0.93
TPM1-208ENST00000404484 ADARP55265 1226 aaKnown RBP20.88■□□□□ 0.93
TPM1-208ENST00000404484 EGFLAMQ63HQ2 1017 aa20.88■□□□□ 0.93
TPM1-208ENST00000404484 PSAPL1Q6NUJ1 521 aa20.88■□□□□ 0.93
TPM1-208ENST00000404484 DPPA4Q7L190 304 aa20.88■□□□□ 0.93
TPM1-208ENST00000404484 SFTPA1Q8IWL2 248 aa20.88■□□□□ 0.93
TPM1-208ENST00000404484 RAVER1Q8IY67 606 aaKnown RBP20.88■□□□□ 0.93
TPM1-208ENST00000404484 CDH19Q9H159 772 aa20.88■□□□□ 0.93
TPM1-208ENST00000404484 C12orf65Q9H3J6 166 aaKnown RBP20.88■□□□□ 0.93
TPM1-208ENST00000404484 IL26Q9NPH9 171 aa20.88■□□□□ 0.93
TPM1-208ENST00000404484 A0A0U1RQS6 177 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 RGSL1A5PLK6 1076 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 A8MX80 341 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 EGFP01133 1207 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 CHRM1P11229 460 aaPredicted RBP20.87■□□□□ 0.93
TPM1-208ENST00000404484 TAC1P20366 129 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 SPINT3P49223 89 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 PTSQ03393 145 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 NFATC2Q13469 925 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 ENPP2Q13822 863 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 LRRC32Q14392 662 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 FAM46CQ5VWP2 391 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 Q6ZS52 159 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 MICALCLQ6ZW33 695 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 PARS2Q7L3T8 475 aaKnown RBP20.87■□□□□ 0.93
TPM1-208ENST00000404484 CEP97Q8IW35 865 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 PIANPQ8IYJ0 282 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 RAB3IL1Q8TBN0 382 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 KCNV2Q8TDN2 545 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 EZH1Q92800 747 aaPredicted RBP20.87■□□□□ 0.93
TPM1-208ENST00000404484 ASB8Q9H765 288 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 PCDHB1Q9Y5F3 818 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 STON1Q9Y6Q2 735 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 DMDP11532 3685 aa20.87■□□□□ 0.93
TPM1-208ENST00000404484 PROCP04070 461 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 C1SP09871 688 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 FDXRP22570 491 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 NHLH1Q02575 133 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 ELP6Q0PNE2 266 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 ITGA9Q13797 1035 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms