RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ZMAT2Q96NC0 199 aaKnown RBP3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 FIZ1Q96SL8 496 aa3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 DDOQ99489 341 aa3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 KIFC3Q9BVG8 833 aa3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 GOLPH3LQ9H4A5 285 aa3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 EPB41L5Q9HCM4 733 aa3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 ZCCHC17Q9NP64 241 aaKnown RBP3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 TAS2R14Q9NYV8 317 aa3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 C5AR2Q9P296 337 aa3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 WDR35Q9P2L0 1181 aa3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 FBXW11Q9UKB1 542 aa3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 FZD10Q9ULW2 581 aa3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 PAM16Q9Y3D7 125 aa3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 PCDHGA5Q9Y5G8 931 aa3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 PASKQ96RG2 1323 aa3.89□□□□□ -1.79
HMGB1P17-201ENST00000403495 COL3A1P02461 1466 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 URADA6NGE7 173 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 A6NL46 340 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 DKC1O60832 514 aaKnown RBP eCLIP3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 DDNO94850 711 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 HIST1H2ABP04908 130 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 CD58P19256 250 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 HIST1H2ADP20671 130 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 UBA1P22314 1058 aaKnown RBP3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 HOXC9P31274 260 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 STX2P32856 288 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 MMP14P50281 582 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 CSNK2A1P68400 391 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 ZBED6P86452 979 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 BNC1Q01954 994 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 DHX34Q14147 1143 aaKnown RBP3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 CCDC96Q2M329 555 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 LETM2Q2VYF4 491 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 LEXMQ3ZCV2 418 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 CCDC184Q52MB2 194 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 KCNT1Q5JUK3 1230 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 RARS2Q5T160 578 aaKnown RBP3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 ERMARDQ5T6L9 678 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 HIST3H2AQ7L7L0 130 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 CSNK2A3Q8NEV1 391 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 Q8NFD4 153 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 OR6J1Q8NGC5 347 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 NSMCE1Q8WV22 266 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 SLC44A1Q8WWI5 657 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 LRRC59Q96AG4 307 aaKnown RBP3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 PTERQ96BW5 349 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 LRFN5Q96NI6 719 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 CAMK1GQ96NX5 476 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 DGAT2Q96PD7 388 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 STK39Q9UEW8 545 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 PPIEQ9UNP9 301 aaKnown RBP3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 SNX9Q9Y5X1 595 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 ZNF521Q96K83 1311 aa3.88□□□□□ -1.79
HMGB1P17-201ENST00000403495 EIF4E1BA6NMX2 242 aaKnown RBP3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 WNT9BO14905 357 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 ASAP2O43150 1006 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 MOSPD3O75425 235 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 TADA2AO75478 443 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 TMEM191BP0C7N4 346 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 TBXAS1P24557 533 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 NMBRP28336 390 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 APOBEC1P41238 236 aaKnown RBP3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 NR4A2P43354 598 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 CAPZA2P47755 286 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 RFX2P48378 723 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 AMTP48728 403 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 LMAN1P49257 510 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 PCYT1AP49585 367 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 LIG4P49917 911 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 ZNF81P51508 661 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 HNRNPH2P55795 449 aaKnown RBP3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 TRAF3Q13114 568 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 IL11RAQ14626 422 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 CTF1Q16619 201 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 KYNUQ16719 465 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 MYLK3Q32MK0 819 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 C1orf141Q5JVX7 400 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 C11orf87Q6NUJ2 197 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 TEX38Q6PEX7 206 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 CACNA2D4Q7Z3S7 1137 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 TECPR1Q7Z6L1 1165 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 ADGRA1Q86SQ6 560 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 FJX1Q86VR8 437 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 NRROSQ86YC3 692 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 ARID3BQ8IVW6 561 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 CEP97Q8IW35 865 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 TMTC2Q8N394 836 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 MINDY1Q8N5J2 469 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 SYT2Q8N9I0 419 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 POGLUT1Q8NBL1 392 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 TRPC4APQ8TEL6 797 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 DUSP19Q8WTR2 217 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 WASF1Q92558 559 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 VPS33AQ96AX1 596 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 PGAP3Q96FM1 320 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 NUDCD1Q96RS6 583 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 HGH1Q9BTY7 390 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 CCDC106Q9BWC9 280 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 FAM129AQ9BZQ8 928 aa3.87□□□□□ -1.79
HMGB1P17-201ENST00000403495 DCLK3Q9C098 648 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms