RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 ARL5AQ9Y689 179 aa19.05■□□□□ 0.64
RTN4-207ENST00000402434 ASXL3Q9C0F0 2248 aa19.05■□□□□ 0.64
RTN4-207ENST00000402434 CEP295Q9C0D2 2601 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 FAM221BA6H8Z2 402 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 C2orf81A6NN90 581 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 CES2O00748 559 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 HYAL3O43820 417 aaPredicted RBP19.04■□□□□ 0.64
RTN4-207ENST00000402434 RFPL3O75679 317 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 ETS1P14921 441 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 LPOP22079 712 aaPredicted RBP19.04■□□□□ 0.64
RTN4-207ENST00000402434 GNPDA1P46926 289 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 DUSP3P51452 185 aaPredicted RBP19.04■□□□□ 0.64
RTN4-207ENST00000402434 DAB2P98082 770 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 TCEA2Q15560 299 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 PYCR3Q53H96 274 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 DOK6Q6PKX4 331 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 PRUNE1Q86TP1 453 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 TAB3Q8N5C8 712 aaPredicted RBP19.04■□□□□ 0.64
RTN4-207ENST00000402434 CCL4L1Q8NHW4 92 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 ACTRT1Q8TDG2 376 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 COG1Q8WTW3 980 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 VPS35Q96QK1 796 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 PAK5Q9P286 719 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 DOLKQ9UPQ8 538 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 ST14Q9Y5Y6 855 aa19.04■□□□□ 0.64
RTN4-207ENST00000402434 ARHGEF17Q96PE2 2063 aaPredicted RBP19.04■□□□□ 0.64
RTN4-207ENST00000402434 TPRP12270 2363 aaKnown RBP19.04■□□□□ 0.64
RTN4-207ENST00000402434 BUD23O43709 281 aaKnown RBP19.03■□□□□ 0.64
RTN4-207ENST00000402434 DNAJC6O75061 913 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 SUN1O94901 812 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 SLC25A14O95258 325 aaPredicted RBP19.03■□□□□ 0.64
RTN4-207ENST00000402434 CRTAMO95727 393 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 RPL22P35268 128 aaKnown RBP19.03■□□□□ 0.64
RTN4-207ENST00000402434 SPAM1P38567 509 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 ADCY8P40145 1251 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 KCNJ1P48048 391 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 PDE1BQ01064 536 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 SEMA5AQ13591 1074 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 OGFOD3Q6PK18 319 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 C4orf22Q6V702 233 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 TAF8Q7Z7C8 310 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 LINC00523Q86TU6 105 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 NRROSQ86YC3 692 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 SLC35F3Q8IY50 421 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 GLMNQ92990 594 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 NAP1L3Q99457 506 aaPredicted RBP19.03■□□□□ 0.64
RTN4-207ENST00000402434 SCNM1Q9BWG6 230 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 RMI1Q9H9A7 625 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 TRIM39Q9HCM9 518 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 RAB6BQ9NRW1 208 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 KCND1Q9NSA2 647 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 EVA1BQ9NVM1 165 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 TMPRSS11EQ9UL52 423 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 EME2A4GXA9 379 aaPredicted RBP19.03■□□□□ 0.64
RTN4-207ENST00000402434 GAPDHSO14556 408 aaPredicted RBP19.03■□□□□ 0.64
RTN4-207ENST00000402434 STX7O15400 261 aaKnown RBP19.03■□□□□ 0.64
RTN4-207ENST00000402434 ASMTLO95671 621 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 GP1BAP07359 652 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 ZSCAN5DPP0CG00 497 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 MYF5P13349 255 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 RPIAP49247 311 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 ILF3Q12906 894 aaKnown RBP eCLIP19.03■□□□□ 0.64
RTN4-207ENST00000402434 PTPRCAPQ14761 206 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 SMAD1Q15797 465 aaKnown RBP19.03■□□□□ 0.64
RTN4-207ENST00000402434 CYP1B1Q16678 543 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 ATP13A5Q4VNC0 1218 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 ARL10Q8N8L6 244 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 OR2M4Q96R27 311 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 GSDMCQ9BYG8 508 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 GPR34Q9UPC5 381 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 KCTD3Q9Y597 815 aa19.03■□□□□ 0.64
RTN4-207ENST00000402434 GLYATL1P3A0A0U1RQE8 302 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 GPR89AB7ZAQ6 455 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 PGRMC1O00264 195 aaKnown RBP19.02■□□□□ 0.63
RTN4-207ENST00000402434 LDB2O43679 373 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 NUAK1O60285 661 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 GPR89BP0CG08 455 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 CTBSQ01459 385 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 LRP8Q14114 963 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 NR0B2Q15466 257 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 CHRNA6Q15825 494 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 CCDC157Q569K6 752 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 DHRS13Q6UX07 377 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 MARK2Q7KZI7 788 aaKnown RBP19.02■□□□□ 0.63
RTN4-207ENST00000402434 TMPRSS7Q7RTY8 843 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 PHYKPLQ8IUZ5 450 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 FAM46DQ8NEK8 389 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 OR4K2Q8NGD2 314 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 ATXN10Q9UBB4 475 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 NEUROG3Q9Y4Z2 214 aa19.02■□□□□ 0.63
RTN4-207ENST00000402434 PCYT1BQ9Y5K3 369 aaPredicted RBP19.02■□□□□ 0.63
RTN4-207ENST00000402434 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.02■□□□□ 0.638e-9■■□□□ 12
RTN4-207ENST00000402434 RP1P56715 2156 aa19.01■□□□□ 0.63
RTN4-207ENST00000402434 E7EVH7 732 aa19.01■□□□□ 0.63
RTN4-207ENST00000402434 TPH1P17752 444 aa19.01■□□□□ 0.63
RTN4-207ENST00000402434 TCP1P17987 556 aaKnown RBP19.01■□□□□ 0.63
RTN4-207ENST00000402434 SPINK2P20155 84 aa19.01■□□□□ 0.63
RTN4-207ENST00000402434 ZNF140P52738 457 aaPredicted RBP19.01■□□□□ 0.63
RTN4-207ENST00000402434 GNG11P61952 73 aa19.01■□□□□ 0.63
RTN4-207ENST00000402434 E2F1Q01094 437 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms