RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 MC4RP32245 332 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 AFF3P51826 1226 aaKnown RBP15.84■□□□□ 0.13
HMGA1-204ENST00000401473 TUBB4BP68371 445 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 CUL1Q13616 776 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 DNAJC21Q5F1R6 531 aaKnown RBP15.84■□□□□ 0.13
HMGA1-204ENST00000401473 ZDHHC20Q5W0Z9 365 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 CENPUQ71F23 418 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 CCDC25Q86WR0 208 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 HEATR4Q86WZ0 1026 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 PIANPQ8IYJ0 282 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 TRAM1L1Q8N609 369 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 MFSD2AQ8NA29 543 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 FBXO36Q8NEA4 188 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 ZNF398Q8TD17 642 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 DTX3LQ8TDB6 740 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 UBXN4Q92575 508 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 ZSCAN5AQ9BUG6 496 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 TEX101Q9BY14 249 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 FAM96AQ9H5X1 160 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 ARFGAP3Q9NP61 516 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 SAYSD1Q9NPB0 183 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 RAD18Q9NS91 495 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 APPL1Q9UKG1 709 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 GOLGA8KD6RF30 607 aa15.83■□□□□ 0.12
HMGA1-204ENST00000401473 GOLGA8TH3BQL2 631 aa15.83■□□□□ 0.12
HMGA1-204ENST00000401473 INPP4BO15327 924 aa15.83■□□□□ 0.12
HMGA1-204ENST00000401473 USP1O94782 785 aa15.83■□□□□ 0.12
HMGA1-204ENST00000401473 VAPBO95292 243 aa15.83■□□□□ 0.12
HMGA1-204ENST00000401473 GOT2P00505 430 aaKnown RBP15.83■□□□□ 0.12
HMGA1-204ENST00000401473 MPLP40238 635 aa15.83■□□□□ 0.12
HMGA1-204ENST00000401473 NFATC2Q13469 925 aa15.83■□□□□ 0.12
HMGA1-204ENST00000401473 SMAD1Q15797 465 aaKnown RBP15.83■□□□□ 0.12
HMGA1-204ENST00000401473 KCTD16Q68DU8 428 aa15.83■□□□□ 0.12
HMGA1-204ENST00000401473 OR6P1Q8NGX9 317 aa15.83■□□□□ 0.12
HMGA1-204ENST00000401473 ASB8Q9H765 288 aa15.83■□□□□ 0.12
HMGA1-204ENST00000401473 GPR27Q9NS67 375 aa15.83■□□□□ 0.12
HMGA1-204ENST00000401473 ZC3H7BQ9UGR2 993 aaKnown RBP15.83■□□□□ 0.12
HMGA1-204ENST00000401473 PNMA8BQ9ULN7 279 aaPredicted RBP15.83■□□□□ 0.12
HMGA1-204ENST00000401473 FAM169AQ9Y6X4 670 aa15.83■□□□□ 0.12
HMGA1-204ENST00000401473 A0A1B0GTW7 788 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 TMEM202A6NGA9 273 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 FUCA1P04066 466 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 POLBP06746 335 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 FAM153BP0C7A2 387 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 THEGLP0DJG4 465 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 CDK3Q00526 305 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 BNC1Q01954 994 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 FAM153CQ494X1 144 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 KHDC1Q4VXA5 237 aaKnown RBP15.82■□□□□ 0.12
HMGA1-204ENST00000401473 PLA2G2CQ5R387 149 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 ARMC3Q5W041 872 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 TCEAL6Q6IPX3 200 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 ADAMTSL4Q6UY14 1074 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 KYAT3Q6YP21 454 aaKnown RBP15.82■□□□□ 0.12
HMGA1-204ENST00000401473 UNC5AQ6ZN44 842 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 PTAR1Q7Z6K3 402 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-204ENST00000401473 TRIM74Q86UV6 250 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 SPATS2Q86XZ4 545 aaKnown RBP15.82■□□□□ 0.12
HMGA1-204ENST00000401473 BTN2A2Q8WVV5 523 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 TCEAL3Q969E4 200 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 ZNF669Q96BR6 464 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-204ENST00000401473 KLHDC7BQ96G42 594 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 COX14Q96I36 57 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 C9orf72Q96LT7 481 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 FMO2Q99518 471 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 FAM129AQ9BZQ8 928 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 FSCN3Q9NQT6 498 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 PCDHGA5Q9Y5G8 931 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 A0A1B0GVT2 93 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 A6NNZ2 444 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 TLR4O00206 839 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 VILLO15195 856 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 EIF3HO15372 352 aaKnown RBP eCLIP15.82■□□□□ 0.12
HMGA1-204ENST00000401473 GNSP15586 552 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 PGAM1P18669 254 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 TGM1P22735 817 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 TEAD1P28347 426 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 MAGEA4P43358 317 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 PRAMEP78395 509 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 PDE1CQ14123 709 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-204ENST00000401473 CRYMQ14894 314 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 ZNF648Q5T619 568 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-204ENST00000401473 PSAPL1Q6NUJ1 521 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 CCNI2Q6ZMN8 369 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-204ENST00000401473 GSPT2Q8IYD1 628 aaKnown RBP15.82■□□□□ 0.12
HMGA1-204ENST00000401473 OR4L1Q8NH43 312 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 PYROXD1Q8WU10 500 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 GLYATL1Q969I3 302 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 CCDC97Q96F63 343 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-204ENST00000401473 SGSM3Q96HU1 749 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 NAT9Q9BTE0 207 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 FOXP3Q9BZS1 431 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 WDR26Q9H7D7 661 aa15.82■□□□□ 0.12
HMGA1-204ENST00000401473 OAS3Q9Y6K5 1087 aaKnown RBP15.82■□□□□ 0.12
HMGA1-204ENST00000401473 TP53BP1Q12888 1972 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-204ENST00000401473 ARID1BQ8NFD5 2236 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-204ENST00000401473 TMEM131Q92545 1883 aa15.81■□□□□ 0.12
HMGA1-204ENST00000401473 MTX2O75431 263 aa15.81■□□□□ 0.12
HMGA1-204ENST00000401473 SLC25A14O95258 325 aaPredicted RBP15.81■□□□□ 0.12
HMGA1-204ENST00000401473 SSTR1P30872 391 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms