RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 KIAA0408Q6ZU52 694 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 SGIP1Q9BQI5 828 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 PAIP1Q9H074 479 aaKnown RBP12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 SCUBE2Q9NQ36 999 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 POLG2Q9UHN1 485 aa12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 MAGED1Q9Y5V3 778 aaPredicted RBP12.61□□□□□ -0.39
PPP4R1-202ENST00000400555 PTGES3LE9PB15 166 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 SLC7A4O43246 635 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 ZNF26P17031 533 aaPredicted RBP12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 GDF5P43026 501 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 ADARP55265 1226 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 ATP6AP1LQ52LC2 224 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 SLC2A7Q6PXP3 512 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 GPSM1Q86YR5 675 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 FAM126BQ8IXS8 530 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 AHI1Q8N157 1196 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 TEX37Q96LM6 180 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 INTS7Q9NVH2 962 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 PCDHB9Q9Y5E1 797 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 C2orf81A6NN90 581 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 B4GAT1O43505 415 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 ASLP04424 464 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 MC4RP32245 332 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 INHBCP55103 352 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 HERC3Q15034 1050 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 FAM171BQ6P995 826 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 PRSS55Q6UWB4 352 aaPredicted RBP12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 GFM2Q969S9 779 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 LRRC58Q96CX6 371 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 EXD2Q9NVH0 621 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 CDC14AQ9UNH5 594 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 DMTF1Q9Y222 760 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 SPO11Q9Y5K1 396 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 A0A0U1RQF3 1178 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 VPS26AO75436 327 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 CD1DP15813 335 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 SLC5A2P31639 672 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 ZNF135P52742 658 aaPredicted RBP12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 LPIN1Q14693 890 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 NFE2Q16621 373 aaPredicted RBP12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 CAMK1DQ8IU85 385 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 CARNMT1Q8N4J0 409 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 DHRSXQ8N5I4 330 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 CLDN19Q8N6F1 224 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 EEF1AKMT1Q8WVE0 214 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 FBXO44Q9H4M3 255 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 MEAF6Q9HAF1 191 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 CLK4Q9HAZ1 481 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 SMOXQ9NWM0 555 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 SUCOQ9UBS9 1254 aaKnown RBP12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 LRFN2Q9ULH4 789 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 GABRQQ9UN88 632 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 FADS3Q9Y5Q0 445 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 SLC30A1Q9Y6M5 507 aa12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 ZFP37Q9Y6Q3 630 aaPredicted RBP12.6□□□□□ -0.39
PPP4R1-202ENST00000400555 TMX2-CTNND1H3BSU7 103 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 ARPC2O15144 300 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 RPP40O75818 363 aaKnown RBP12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 TMCC1O94876 653 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 RGRP47804 291 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 GSK3BP49841 420 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 IST1P53990 364 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 LAPTM5Q13571 262 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 IMPG1Q17R60 797 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 LDLRAP1Q5SW96 308 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 SLCO4A1Q96BD0 722 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 ULK4Q96C45 1275 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 ADI1Q9BV57 179 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 ALG2Q9H553 416 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 CSNK1G1Q9HCP0 422 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 TLR8Q9NR97 1041 aaKnown RBP12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 PKP3Q9Y446 797 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 A0A1W2PQ67 120 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 LDB2O43679 373 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 ZBTB11O95625 1053 aaPredicted RBP12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 ALBP02768 609 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 S100BP04271 92 aaPredicted RBP12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 GSNP06396 782 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 RHOCP08134 193 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 ZNF37AP17032 561 aaPredicted RBP12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 ADSLP30566 484 aaPredicted RBP12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 PAGE3Q5JUK9 113 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 HMBOX1Q6NT76 420 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 BNIPLQ7Z465 357 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 OR52B6Q8NGF0 335 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 SYTL2Q9HCH5 934 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 VPS45Q9NRW7 570 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 PNPLA3Q9NST1 481 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 CMTM6Q9NX76 183 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 UBA2Q9UBT2 640 aaPredicted RBP12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 EBF1Q9UH73 591 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 CIDEBQ9UHD4 219 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 HAS3O00219 553 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 SNAP91O60641 907 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 LDLRP01130 860 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 HSPA1AP0DMV8 641 aaKnown RBP12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 HSPA1BP0DMV9 641 aaKnown RBP12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 GSSP48637 474 aa12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 LARP4Q71RC2 724 aaKnown RBP eCLIP12.59□□□□□ -0.39
PPP4R1-202ENST00000400555 CMTR2Q8IYT2 770 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms