RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 NDST3O95803 873 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 TRBC1P01850 177 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 IFNA16P05015 189 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 MMP3P08254 477 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 VPS26BQ4G0F5 336 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 ATXN7L2Q5T6C5 722 aaPredicted RBP8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 RNF148Q8N7C7 305 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 FAM98AQ8NCA5 519 aaKnown RBP8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 SPOCK2Q92563 424 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 AP2M1Q96CW1 435 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 CENPNQ96H22 339 aaPredicted RBP8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 SLC9A7Q96T83 725 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 SMPD3Q9NY59 655 aaPredicted RBP8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 GRIN2DO15399 1336 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 RCCD1A6NED2 376 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 GTPBP1O00178 669 aaKnown RBP8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 FPGTO14772 594 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 PLSCR1O15162 318 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 MAGEB3O15480 346 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 TMCC2O75069 709 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 CCNE2O96020 404 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 PKMP14618 531 aaKnown RBP8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 ZNF37AP17032 561 aaPredicted RBP8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 HDCP19113 662 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 ALDH4A1P30038 563 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 CDKN2BP42772 138 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 STARP49675 285 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 AP1S1P61966 158 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 TUSC3Q13454 348 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 SLC5A9Q2M3M2 681 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 DPY19L1Q2PZI1 675 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 ATP13A5Q4VNC0 1218 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 DET1Q7L5Y6 550 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 C17orf64Q86WR6 236 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 KIAA0319LQ8IZA0 1049 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 FIBCD1Q8N539 461 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 PRICKLE1Q96MT3 831 aaPredicted RBP8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 SMAD5Q99717 465 aaKnown RBP8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 SLC25A51Q9H1U9 297 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 MIOSQ9NXC5 875 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 SMPD4Q9NXE4 827 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 TOR4AQ9NXH8 423 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 ELOVL7A1L3X0 281 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 GABRDO14764 452 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 PGRMC2O15173 223 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 MATN3O15232 486 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 CCR4P51679 360 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 SLC18A1P54219 525 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 HSPA14Q0VDF9 509 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 GPR107Q5VW38 600 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 FAM43BQ6ZT52 329 aaPredicted RBP8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 PACRGLQ8N7B6 248 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 NR4A3Q92570 626 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 MAGEH1Q9H213 219 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 KCNN2Q9H2S1 579 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 ANKHQ9HCJ1 492 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 ARL8BQ9NVJ2 186 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 PNPOQ9NVS9 261 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 IGSF9Q9P2J2 1179 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 ZNHIT2Q9UHR6 403 aa8.33□□□□□ -1.08
SPTLC3-201ENST00000399002 FADS2P1A8MWK0 482 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 E9PAM4 449 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 ELFN1P0C7U0 828 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 THRBP10828 461 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 CCT3P49368 545 aaKnown RBP8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 RPP38P78345 283 aaKnown RBP8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 LCP2Q13094 533 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 DGCR6Q14129 220 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 PIK3R6Q5UE93 754 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 IQCKQ8N0W5 287 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 PSMA8Q8TAA3 256 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 AGO3Q9H9G7 860 aaKnown RBP8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 ZFYVE1Q9HBF4 777 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 TMEM27Q9HBJ8 222 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 CCDC59Q9P031 241 aaKnown RBP8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 FZD10Q9ULW2 581 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 TMEM150BA6NC51 233 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 ARHGEF33A8MVX0 844 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 REM1O75628 298 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 SERPINA3P01011 423 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 GSTT2BP0CG30 244 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 ZNF12P17014 697 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 L1CAMP32004 1257 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 KHKP50053 298 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 FOXM1Q08050 763 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 TAF1AQ15573 450 aaPredicted RBP8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 CCNYL2Q5T2Q4 361 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 RNASEH2BQ5TBB1 312 aaKnown RBP8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 DEF8Q6ZN54 512 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 CLNKQ7Z7G1 428 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 SLCO6A1Q86UG4 719 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 PEX5LQ8IYB4 626 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 DCAKDQ8WVC6 231 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 HDAC10Q969S8 669 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 AGAP2Q99490 1192 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 DNAAF2Q9NVR5 837 aaKnown RBP8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 MAFBQ9Y5Q3 323 aaPredicted RBP8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 FAM208AQ9UK61 1670 aaKnown RBP8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 TBC1D3BA6NDS4 549 aa8.32□□□□□ -1.08
SPTLC3-201ENST00000399002 TISP43B9A030 160 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms