RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 AIREO43918 545 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SLITRK5O94991 958 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 PAPSS2O95340 614 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 FARS2O95363 451 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 FCER2P06734 321 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 CYP2D6P10635 497 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 MYL9P24844 172 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 NDST1P52848 882 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TGFBR3Q03167 851 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TRAM1Q15629 374 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 CBWD6Q4V339 395 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 CELF3Q5SZQ8 465 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 HYIQ5T013 277 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SWT1Q5T5J6 900 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 IDNKQ5T6J7 187 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 KIAA0895LQ68EN5 471 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TAPT1Q6NXT6 567 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 CCNI2Q6ZMN8 369 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 PTAR1Q7Z6K3 402 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 CYGBQ8WWM9 190 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 HERVK_113Q902F9 699 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SLC5A5Q92911 643 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 CERS2Q96G23 380 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 C7orf50Q9BRJ6 194 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 THUMPD3Q9BV44 507 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 RUSC1Q9BVN2 902 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TMEM39BQ9GZU3 492 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 KLHL25Q9H0H3 589 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 KAT8Q9H7Z6 458 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 SPAG4Q9NPE6 437 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 FAIMQ9NVQ4 179 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 FANCLQ9NW38 375 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TMEM63CQ9P1W3 806 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 FBXL3Q9UKT7 428 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 DMTF1Q9Y222 760 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 PLAAQ9Y263 795 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 FIS1Q9Y3D6 152 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 USP15Q9Y4E8 981 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 THADAQ6YHU6 1953 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 LRRC37AA6NMS7 1700 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 A0A087X0B3 334 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 LRP5LA4QPB2 252 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TRIM64BA6NI03 449 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 E9PBE3 544 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 MDM4O15151 490 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SOCS5O75159 536 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 LATS1O95835 1130 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SPATA31D3P0C874 917 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SFTPCP11686 197 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 UGT1A1P22309 533 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SLC15A1P46059 708 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 NDST2P52849 883 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 RPS3AP61247 264 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 GNGT1P63211 74 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 CACNG1Q06432 222 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 PRKG2Q13237 762 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ITIH4Q14624 930 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 HABP4Q5JVS0 413 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 ARMC4Q5T2S8 1044 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TRAF7Q6Q0C0 670 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SPATA31D4Q6ZUB0 917 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ACOT1Q86TX2 421 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SLC44A3Q8N4M1 653 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 GPT2Q8TD30 523 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TRPM4Q8TD43 1214 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ZBED6CLQ96FA7 236 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 FAM163AQ96GL9 167 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 C11orf49Q9H6J7 331 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 MEPEQ9NQ76 525 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 EIF2B3Q9NR50 452 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 MAN1B1Q9UKM7 699 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 CYP3A7-CYP3A51PA0A087WV96 503 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SPTLC1O15269 473 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TGM5O43548 720 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 PTPRAP18433 802 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 RPL17P18621 184 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 PVALBP20472 110 aaPredicted RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 CYP3A7P24462 503 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 HTR3AP46098 478 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 RPS9P46781 194 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 TKTL1P51854 596 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 CAV3P56539 151 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ADIGQ0VDE8 80 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 MFSD13AQ14CX5 517 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SNX20Q7Z614 316 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ZER1Q7Z7L7 766 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 GPSM1Q86YR5 675 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 TRAPPC5Q8IUR0 188 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ZNF440Q8IYI8 595 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 DSELQ8IZU8 1212 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ARL14Q8N4G2 192 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.72□□□□□ -1.97
CHD9-202ENST00000398510 CDYL2Q8N8U2 506 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 SLC44A5Q8NCS7 719 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 KBTBD8Q8NFY9 601 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 OR8K5Q8NH50 307 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 BRIX1Q8TDN6 353 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 NEK7Q8TDX7 302 aa2.72□□□□□ -1.97
CHD9-202ENST00000398510 PHF10Q8WUB8 498 aaKnown RBP2.72□□□□□ -1.97
CHD9-202ENST00000398510 OMA1Q96E52 524 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms