RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 CCR3P51677 355 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 DCDC1P59894 354 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 RALGDSQ12967 914 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 NEK5Q6P3R8 708 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 PACS1Q6VY07 963 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 HSD11B1LQ7Z5J1 315 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 CNTN4Q8IWV2 1026 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 CAMKK1Q8N5S9 505 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 TRAM1L1Q8N609 369 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 DTWD2Q8NBA8 298 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 GPR150Q8NGU9 434 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 GDAP1Q8TB36 358 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 ZNF398Q8TD17 642 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 MTBPQ96DY7 904 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 SGSM3Q96HU1 749 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 HHIPQ96QV1 700 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 AGAP2Q99490 1192 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 ZSCAN5AQ9BUG6 496 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 PLAC1Q9HBJ0 212 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 MED4Q9NPJ6 270 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 CD84Q9UIB8 345 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 NFS1Q9Y697 457 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 CKAP5Q14008 2032 aa14.14□□□□□ -0.15
SKA1-202ENST00000398452 ATG2BQ96BY7 2078 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 A0A0U1RQS6 177 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 UBA6A0AVT1 1052 aaPredicted RBP14.13□□□□□ -0.15
SKA1-202ENST00000398452 OR51F1A6NGY5 319 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 CXorf49A8MYA2 514 aaPredicted RBP14.13□□□□□ -0.15
SKA1-202ENST00000398452 CFAP99D6REC4 459 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 RNGTTO60942 597 aaKnown RBP14.13□□□□□ -0.15
SKA1-202ENST00000398452 RECQL5O94762 991 aaPredicted RBP14.13□□□□□ -0.15
SKA1-202ENST00000398452 SNRPAP09012 282 aaKnown RBP14.13□□□□□ -0.15
SKA1-202ENST00000398452 RALBP11234 206 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 ZNF7P17097 686 aaPredicted RBP14.13□□□□□ -0.15
SKA1-202ENST00000398452 PSMA3P25788 255 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 SLC1A2P43004 574 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 TPMTP51580 245 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 ADPRHP54922 357 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 CTBP1Q13363 440 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 RASA2Q15283 850 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 CHRNA6Q15825 494 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 RAET1GQ6H3X3 334 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 Q6ZVL8 140 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 ZNF765Q7L2R6 523 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 CYP2U1Q7Z449 544 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 MTERF4Q7Z6M4 381 aaKnown RBP14.13□□□□□ -0.15
SKA1-202ENST00000398452 CILP2Q8IUL8 1156 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 ZNF454Q8N9F8 522 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 C2CD4AQ8NCU7 369 aaPredicted RBP14.13□□□□□ -0.15
SKA1-202ENST00000398452 GPR26Q8NDV2 337 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 OR2T34Q8NGX1 318 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 ZBTB9Q96C00 473 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 DTD2Q96FN9 168 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 DCUN1D1Q96GG9 259 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 SPACA7Q96KW9 195 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 KCNK17Q96T54 332 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 IL26Q9NPH9 171 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 ITM2CQ9NQX7 267 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 SMYD2Q9NRG4 433 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 INTS10Q9NVR2 710 aaKnown RBP14.13□□□□□ -0.15
SKA1-202ENST00000398452 GGT7Q9UJ14 662 aa14.13□□□□□ -0.15
SKA1-202ENST00000398452 FAM186AA6NE01 2351 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 NDUFS2O75306 463 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 PIAS1O75925 651 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 MT-ND3P03897 115 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 ARNTP27540 789 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 FOXN2P32314 431 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 GPR1P46091 355 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 LEPRP48357 1165 aaKnown RBP14.12□□□□□ -0.15
SKA1-202ENST00000398452 XIAPP98170 497 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 NFATC2Q13469 925 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 PEX6Q13608 980 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 ANGPT1Q15389 498 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 AGBL2Q5U5Z8 902 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 ASCL5Q7RTU5 278 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 GALNT7Q86SF2 657 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 HORMAD1Q86X24 394 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 DENND6AQ8IWF6 608 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 RBFAQ8N0V3 343 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 DTX3LQ8TDB6 740 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 HEXDCQ8WVB3 486 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 EID2BQ96D98 161 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 PGM2Q96G03 612 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 ATXN7L3BQ96GX2 97 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 VPS39Q96JC1 886 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 COQ10AQ96MF6 247 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 TSNARE1Q96NA8 513 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 RBBP8Q99708 897 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 RIOK2Q9BVS4 552 aaKnown RBP14.12□□□□□ -0.15
SKA1-202ENST00000398452 ABCG8Q9H221 673 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 RHOJQ9H4E5 214 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 FAM96AQ9H5X1 160 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 TMBIM4Q9HC24 238 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 CD248Q9HCU0 757 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 FBXO6Q9NRD1 293 aaPredicted RBP14.12□□□□□ -0.15
SKA1-202ENST00000398452 SPATA6Q9NWH7 488 aaPredicted RBP14.12□□□□□ -0.15
SKA1-202ENST00000398452 SENP1Q9P0U3 644 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 NFKBIL1Q9UBC1 381 aaPredicted RBP14.12□□□□□ -0.15
SKA1-202ENST00000398452 SERGEFQ9UGK8 458 aa14.12□□□□□ -0.15
SKA1-202ENST00000398452 CORO1CQ9ULV4 474 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms