RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 PYHIN1Q6K0P9 492 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ZDHHC14Q8IZN3 488 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ALLCQ8N6M5 410 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 PSPC1Q8WXF1 523 aaKnown RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 KAT5Q92993 513 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 MARC2Q969Z3 335 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 RBM15Q96T37 977 aaKnown RBP eCLIP6.57□□□□□ -1.362e-6■■□□□ 14.3
TM9SF4-202ENST00000398022 ST6GALNAC4Q9H4F1 302 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 MID1IP1Q9NPA3 183 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ADARB2Q9NS39 739 aaKnown RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 RAB20Q9NX57 234 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 PPT2Q9UMR5 302 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 WBP11Q9Y2W2 641 aaKnown RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 LOXHD1Q8IVV2 1947 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 TPP1O14773 563 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC16A4O15374 487 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 CRCPO75575 148 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ARP10275 920 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 CCNB1P14635 433 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 DPP6P42658 865 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 HK2P52789 917 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 PPP5CP53041 499 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 POLGP54098 1239 aaPredicted RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 GTF2BQ00403 316 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 CREB5Q02930 508 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ELP6Q0PNE2 266 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ITGA9Q13797 1035 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 TIGD6Q17RP2 521 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 GPAT3Q53EU6 434 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 STRIP1Q5VSL9 837 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 RHBDF2Q6PJF5 856 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 LAYNQ6UX15 382 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 RALGPS2Q86X27 583 aaPredicted RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 FITM2Q8N6M3 262 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF248Q8NDW4 579 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 OR7D4Q8NG98 312 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ATG4AQ8WYN0 398 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 RHBDF1Q96CC6 855 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 FAM71F1Q96KD3 344 aaPredicted RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 KREMEN1Q96MU8 473 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 QRFPRQ96P65 431 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 SPON2Q9BUD6 331 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF717Q9BY31 904 aaPredicted RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 HOXD1Q9GZZ0 328 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 AP5M1Q9H0R1 490 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 QRSL1Q9H0R6 528 aaKnown RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 PCDH9Q9HC56 1237 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 S100A14Q9HCY8 104 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 CHST7Q9NS84 486 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 COQ6Q9Y2Z9 468 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 KLF2Q9Y5W3 355 aaPredicted RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 CCDC160A6NGH7 325 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF197O14709 1029 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC22A1O15245 554 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ATG13O75143 517 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 TRIM3O75382 744 aaPredicted RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 CCNKO75909 580 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 RASAL1O95294 804 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 TMIGD3P0DMS9 266 aaPredicted RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC2A3P11169 496 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 TNNI3P19429 210 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 PCSK1P29120 753 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 GJC1P36383 396 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 PTDSS1P48651 473 aaKnown RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 HCAR3P49019 387 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 CAMLGP49069 296 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 CCR9P51686 369 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 FKBP1AP62942 108 aaKnown RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 PTP4A2Q12974 167 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ABRQ12979 859 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 GTF2H3Q13889 308 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 KCNJ8Q15842 424 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 GTDC1Q4AE62 458 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 PAOXQ6QHF9 649 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC22A25Q6T423 547 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ETV3LQ6ZN32 361 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 CAMKMTQ7Z624 323 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 RIOX2Q8IUF8 465 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ADGRG5Q8IZF4 528 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 KDF1Q8NAX2 398 aaPredicted RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 GLIS1Q8NBF1 620 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 BBS1Q8NFJ9 593 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 PYROXD1Q8WU10 500 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 TRAPPC12Q8WVT3 735 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 ATG4CQ96DT6 458 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 C9orf72Q96LT7 481 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 POP1Q99575 1024 aaKnown RBP6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 TUBB6Q9BUF5 446 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 OSBPL8Q9BZF1 889 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 TRABDQ9H4I3 376 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 C10orf88Q9H8K7 445 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 SAYSD1Q9NPB0 183 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 DNAJC11Q9NVH1 559 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 CACNG4Q9UBN1 327 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 DNAJB9Q9UBS3 223 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 FAM198AQ9UFP1 575 aa6.57□□□□□ -1.36
TM9SF4-202ENST00000398022 PARP14Q460N5 1801 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 BLACEA4D250 179 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 CFAP99D6REC4 459 aa6.56□□□□□ -1.36
TM9SF4-202ENST00000398022 hCG_2039718K7EN88 272 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms