RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 OR51F1A6NGY5 319 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 UPK3BL1B0FP48 263 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 UPK3BL2E5RIL1 263 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 GSC2O15499 205 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 GOT2P00505 430 aaKnown RBP19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 MYL2P10916 166 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 C2orf27AQ580R0 203 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 GRTP1Q5TC63 336 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 ZNF470Q6ECI4 717 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 DSG4Q86SJ6 1040 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 TTC7BQ86TV6 843 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 TSPAN33Q86UF1 283 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 DENND6AQ8IWF6 608 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 TEX9Q8N6V9 391 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 GABPB2Q8TAK5 448 aaPredicted RBP19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 ZNF570Q96NI8 536 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 MIPEPQ99797 713 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 CADM1Q9BY67 442 aaKnown RBP19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 DENND2DQ9H6A0 471 aaPredicted RBP19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 ARL8BQ9NVJ2 186 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 SORCS3Q9UPU3 1222 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 GYG2O15488 501 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 SNNO75324 88 aaPredicted RBP19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 BPGMP07738 259 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 F7P08709 466 aaPredicted RBP19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 XPAP23025 273 aaPredicted RBP19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 NFKBIAP25963 317 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 HADHAP40939 763 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 CTBP1Q13363 440 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 NUDCD3Q8IVD9 361 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 OR4L1Q8NH43 312 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 KCNV2Q8TDN2 545 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 MSANTD3Q96H12 275 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 STN1Q9H668 368 aaKnown RBP19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 B4GALT6Q9UBX8 382 aa19.25■□□□□ 0.67
PDLIM2-204ENST00000397760 SYNCRIPO60506 623 aaKnown RBP19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 CHRM1P11229 460 aaPredicted RBP19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 ESRRAP11474 423 aaPredicted RBP19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 NTSR1P30989 418 aa19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 SLC1A2P43004 574 aa19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 METAP1P53582 386 aa19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 BST1Q10588 318 aa19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 BMPR2Q13873 1038 aa19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 MROH9Q5TGP6 573 aa19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 LRRC66Q68CR7 880 aa19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 SDE2Q6IQ49 451 aa19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 PARS2Q7L3T8 475 aaKnown RBP19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 CRLF3Q8IUI8 442 aa19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 MMAAQ8IVH4 418 aaKnown RBP19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 C2CD4AQ8NCU7 369 aaPredicted RBP19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 FAM3CQ92520 227 aa19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 PCDH12Q9NPG4 1184 aa19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 FKBPLQ9UIM3 349 aa19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 FBXO5Q9UKT4 447 aa19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 COL4A2P08572 1712 aa19.24■□□□□ 0.67
PDLIM2-204ENST00000397760 FCHO1O14526 889 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 CYP2A6P11509 494 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 GM2AP17900 193 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 LHCGRP22888 699 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 ITGB7P26010 798 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 SPRP35270 261 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 CSE1LP55060 971 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 CAMK2GQ13555 558 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 AFTPHQ6ULP2 937 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 ADHFE1Q8IWW8 467 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 LMNTD2Q8IXW0 634 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 ARMC2Q8NEN0 867 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 ARRDC3Q96B67 414 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 PPP1R16AQ96I34 528 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 RBBP8Q99708 897 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 THAP1Q9NVV9 213 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 STOML1Q9UBI4 398 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 NKX1-2Q9UD57 310 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 FNDC3AQ9Y2H6 1198 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 HMX2A2RU54 273 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 SHISA7A6NL88 538 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 C1QTNF3-AMACRE9PGA6 284 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 CD3EAPO15446 510 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 KIF1CO43896 1103 aaKnown RBP19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 MAGEC1O60732 1142 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 AHSGP02765 367 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 ITGA2BP08514 1039 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 MPP1Q00013 466 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 PTSQ03393 145 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 KIAA0408Q6ZU52 694 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 CILP2Q8IUL8 1156 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 IL17RCQ8NAC3 791 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 PBXIP1Q96AQ6 731 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 MCUR1Q96AQ8 359 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 MIEF2Q96C03 454 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 C19orf43Q9BQ61 176 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 FAM96AQ9H5X1 160 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 DYRK4Q9NR20 520 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 CATSPERZQ9NTU4 200 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 MARCH4Q9P2E8 410 aaPredicted RBP19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 DUSP12Q9UNI6 340 aa19.23■□□□□ 0.67
PDLIM2-204ENST00000397760 CAPN14A8MX76 684 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 H7C0S8 307 aa19.22■□□□□ 0.67
PDLIM2-204ENST00000397760 GLRA3O75311 464 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms