RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ZFRQ96KR1 1074 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 YME1L1Q96TA2 773 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 ABCD2Q9UBJ2 740 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 TRPS1Q9UHF7 1281 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 RAI2Q9Y5P3 530 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 ABCB1P08183 1280 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 MMP2P08253 660 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 GLULP15104 373 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 ME2P23368 584 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 JAK1P23458 1154 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 SPAM1P38567 509 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 FPGSQ05932 587 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 POU6F1Q14863 301 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 RARS2Q5T160 578 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 AHI1Q8N157 1196 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 BEND7Q8N7W2 519 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 RBM15BQ8NDT2 890 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 HMCESQ96FZ2 354 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 TMEM106CQ9BVX2 250 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 A0A0G2JND7 137 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 DFFAO00273 331 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 PER2O15055 1255 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 PRKCGP05129 697 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 ERVK-8P63133 956 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 KLF10Q13118 480 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 HECTD2Q5U5R9 776 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 EID3Q8N140 333 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 TDRD5Q8NAT2 981 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 YTHDF1Q9BYJ9 559 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 TRIM15Q9C019 465 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 TDP1Q9NUW8 608 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 LHX3Q9UBR4 397 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 TRAF6Q9Y4K3 522 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 NR2E3Q9Y5X4 410 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 AP1G1O43747 822 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 MTHFD2P13995 350 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 SLC34A1Q06495 639 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 MTDHQ86UE4 582 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 PTRH1Q86Y79 214 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 TMC8Q8IU68 726 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 UHMK1Q8TAS1 419 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 CFAP36Q96G28 342 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 EFCAB11Q9BUY7 163 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 IL1RAPL1Q9NZN1 696 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 H3BNX3 289 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 AZIN1O14977 448 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 AVILO75366 819 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 ERN1O75460 977 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 CATP04040 527 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 ERVK-10P10266 1014 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 ATXN1P54253 815 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 ENPP2Q13822 863 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 DDR2Q16832 855 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 CERCAMQ5T4B2 595 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 FAM46CQ5VWP2 391 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 SCUBE1Q8IWY4 988 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 TMIEQ8NEW7 156 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 BCL7CQ8WUZ0 217 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 LINC00615Q96LM1 132 aaPredicted RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 CHRDQ9H2X0 955 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 DPEP2Q9H4A9 486 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 ZNF839A8K0R7 811 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 A8MT66 165 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 TBX19O60806 448 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 ATP6V1C1P21283 382 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 EEFSECP57772 596 aaKnown RBP5.83□□□□□ -1.48
PTPRD-206ENST00000397617 LLGL1Q15334 1064 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 FBXO39Q8N4B4 442 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 CSGALNACT1Q8TDX6 532 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 TBC1D20Q96BZ9 403 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 MYO19Q96H55 970 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 LMLNQ96KR4 655 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 RNF145Q96MT1 663 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 COG4Q9H9E3 785 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 NPHS2Q9NP85 383 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 PI4KAP42356 2102 aa5.83□□□□□ -1.48
PTPRD-206ENST00000397617 PTPRZ1P23471 2315 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 PQBP1O60828 265 aaKnown RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 BCAS2O75934 225 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 PIGNO95427 931 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 PGM1P36871 562 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 TRIM32Q13049 653 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 RFX4Q33E94 735 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 SIRPB2Q5JXA9 342 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 ESRP1Q6NXG1 681 aaKnown RBP5.82□□□□□ -1.48
PTPRD-206ENST00000397617 ZFP28Q8NHY6 868 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 ASZ1Q8WWH4 475 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 IGSF8Q969P0 613 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 FOPNLQ96NB1 174 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 P2RY12Q9H244 342 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 ZFYVE1Q9HBF4 777 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 ZDHHC3Q9NYG2 299 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 PDP2Q9P2J9 529 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 SFMBT1Q9UHJ3 866 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 UBDO15205 165 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 CFLARO15519 480 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 SEMA3DO95025 777 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 FTH1P02794 183 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 EBLN1P0CF75 366 aa5.82□□□□□ -1.48
PTPRD-206ENST00000397617 ZCCHC18P0CG32 403 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms