RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 DNASE1L3Q13609 305 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 IL11RAQ14626 422 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 KIR2DS5Q14953 304 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 PTPRRQ15256 657 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 ZNF787Q6DD87 383 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 RFLNAQ6ZTI6 216 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 CHST15Q7LFX5 561 aaPredicted RBP14.82□□□□□ -0.04
SEC13-206ENST00000397102 MAMDC2Q7Z304 686 aaPredicted RBP14.82□□□□□ -0.04
SEC13-206ENST00000397102 PGBD5Q8N414 524 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 AVL9Q8NBF6 648 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 EXD1Q8NHP7 514 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 SCAMP4Q969E2 229 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 RNF31Q96EP0 1072 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 C9orf72Q96LT7 481 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 MGME1Q9BQP7 344 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 TBC1D10AQ9BXI6 508 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 TRIM55Q9BYV6 548 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 NOD2Q9HC29 1040 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 VPS18Q9P253 973 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 RCOR3Q9P2K3 495 aaPredicted RBP14.82□□□□□ -0.04
SEC13-206ENST00000397102 ZNHIT2Q9UHR6 403 aa14.82□□□□□ -0.04
SEC13-206ENST00000397102 PCYT1BQ9Y5K3 369 aaPredicted RBP14.82□□□□□ -0.04
SEC13-206ENST00000397102 PIPSLA2A3N6 862 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 OR5K4A6NMS3 321 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 TOX3O15405 576 aaPredicted RBP14.81□□□□□ -0.04
SEC13-206ENST00000397102 CCNYL3P0C7X3 344 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 F3P13726 295 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 CTPS1P17812 591 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 DCTP40126 519 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 GARSP41250 739 aaKnown RBP14.81□□□□□ -0.04
SEC13-206ENST00000397102 GFERP55789 205 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 OGDHQ02218 1023 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 CAMK4Q16566 473 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 NADK2Q4G0N4 442 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 RALGPS1Q5JS13 557 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 ERMARDQ5T6L9 678 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 ARMC12Q5T9G4 340 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 LRRC66Q68CR7 880 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 DCUN1D2Q6PH85 259 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 RASGRP3Q8IV61 690 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 PIH1D2Q8WWB5 315 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 SEC14L1Q92503 715 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 OR6C1Q96RD1 312 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 KCTD15Q96SI1 283 aaPredicted RBP14.81□□□□□ -0.04
SEC13-206ENST00000397102 AGAP2Q99490 1192 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 SNRNP25Q9BV90 132 aaKnown RBP14.81□□□□□ -0.04
SEC13-206ENST00000397102 NLRC4Q9NPP4 1024 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 CPNE7Q9UBL6 633 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 KCNK6Q9Y257 313 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 PCDHGA9Q9Y5G4 932 aaKnown RBP14.81□□□□□ -0.04
SEC13-206ENST00000397102 HIVEP3Q5T1R4 2406 aa14.81□□□□□ -0.04
SEC13-206ENST00000397102 A0A0U1RQS6 177 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 C21orf140B9A014 251 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 PEX11BO96011 259 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 MT-ND3P03897 115 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 FGF5P12034 268 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 ZNF30P17039 623 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 CASP14P31944 242 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 PGDP52209 483 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 SH3BP2P78314 561 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 PTSQ03393 145 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 SYCP1Q15431 976 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 TICAM1Q8IUC6 712 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 TP53INP2Q8IXH6 220 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 NDUFAF2Q8N183 169 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 BBS5Q8N3I7 341 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 SLC25A23Q9BV35 468 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 ZNF768Q9H5H4 540 aaKnown RBP14.8□□□□□ -0.04
SEC13-206ENST00000397102 RMI1Q9H9A7 625 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 UCK1Q9HA47 277 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 CASS4Q9NQ75 786 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 OGFRQ9NZT2 677 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 LNPEPQ9UIQ6 1025 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 PADI1Q9ULC6 663 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 PRKAB1Q9Y478 270 aa14.8□□□□□ -0.04
SEC13-206ENST00000397102 SNX2O60749 519 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 SPAG6O75602 509 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 ATP1A1P05023 1023 aaKnown RBP14.79□□□□□ -0.04
SEC13-206ENST00000397102 ACP5P13686 325 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 COL8A1P27658 744 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 HCAR3P49019 387 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 KLK7P49862 253 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 SEPHS1P49903 392 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 ZNF135P52742 658 aaPredicted RBP14.79□□□□□ -0.04
SEC13-206ENST00000397102 MAXP61244 160 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 UBE2IP63279 158 aaKnown RBP14.79□□□□□ -0.04
SEC13-206ENST00000397102 TCP11X2Q5H9J9 407 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 PPP6R3Q5H9R7 873 aaPredicted RBP14.79□□□□□ -0.04
SEC13-206ENST00000397102 CT55Q8WUE5 264 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 THAP4Q8WY91 577 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 PEBP4Q96S96 227 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 RIOK2Q9BVS4 552 aaKnown RBP14.79□□□□□ -0.04
SEC13-206ENST00000397102 SLC29A3Q9BZD2 475 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 BRD8Q9H0E9 1235 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 ACTL8Q9H568 366 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 MLXIPLQ9NP71 852 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 LHX9Q9NQ69 397 aa14.79□□□□□ -0.04
SEC13-206ENST00000397102 FAM207AQ9NSI2 230 aaPredicted RBP14.79□□□□□ -0.04
SEC13-206ENST00000397102 SEPT11Q9NVA2 429 aaKnown RBP14.79□□□□□ -0.04
SEC13-206ENST00000397102 TCP11X1B4DZS4 312 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms