RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 NOD1Q9Y239 953 aa15.92■□□□□ 0.14
CCHCR1-202ENST00000396263 RNF11Q9Y3C5 154 aa15.92■□□□□ 0.14
CCHCR1-202ENST00000396263 AK5Q9Y6K8 562 aa15.92■□□□□ 0.14
CCHCR1-202ENST00000396263 GREB1Q4ZG55 1949 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 A0A1W2PQ45 241 aaPredicted RBP15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 A0A1W2PQY0 241 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 BOLA2-SMG1P6H3BVE0 249 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 SYN3O14994 580 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 KERAO60938 352 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 BMP2P12643 396 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 FOXA1P55317 472 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 MYLK3Q32MK0 819 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 CLLU1OSQ5K130 101 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 RNF168Q8IYW5 571 aaPredicted RBP15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 ALDH16A1Q8IZ83 802 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 DIS3LQ8TF46 1054 aaKnown RBP15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 KIAA1191Q96A73 305 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 TRIB3Q96RU7 358 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 TLR8Q9NR97 1041 aaKnown RBP15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 SH3GLB1Q9Y371 365 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 MYOCOSA0A1B0GUC4 107 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 SLC12A8A0AV02 714 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 NR5A2O00482 541 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 NME4O00746 187 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 SERPINF2P08697 491 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 ATP6V1B2P21281 511 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 OR1G1P47890 313 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 PRMT2P55345 433 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 ATP6V0D1P61421 351 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 ARHGEF6Q15052 776 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 COQ5Q5HYK3 327 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 C10orf120Q5SQS8 335 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 KLHL35Q6PF15 583 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 RTN4RL1Q86UN2 441 aaPredicted RBP15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 TTC9BQ8N6N2 239 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 GPR152Q8TDT2 470 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 CDKN2AIPNLQ96HQ2 116 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 SLC29A1Q99808 456 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 DERL2Q9GZP9 239 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 TUBB1Q9H4B7 451 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 NOL11Q9H8H0 719 aaKnown RBP15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 SYTL2Q9HCH5 934 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 SDR39U1Q9NRG7 319 aaPredicted RBP15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 PTGDR2Q9Y5Y4 395 aa15.91■□□□□ 0.14
CCHCR1-202ENST00000396263 LRRC14BA6NHZ5 514 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 AQP12BA6NM10 295 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 ZNF839A8K0R7 811 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 CLASP2O75122 1294 aaKnown RBP15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 NDST3O95803 873 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 HSD17B1P14061 328 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 GFAPP14136 432 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 LBPP18428 481 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 CAPN3P20807 821 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 FGFR3P22607 806 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 GRIA3P42263 894 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 DCTN2Q13561 401 aaKnown RBP15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 GRB7Q14451 532 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 GEN1Q17RS7 908 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 NADSYN1Q6IA69 706 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 PPP4R4Q6NUP7 873 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 ERMP1Q7Z2K6 904 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 AMIGO2Q86SJ2 522 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 AQP12AQ8IXF9 295 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 GOLM1Q8NBJ4 401 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 ATAD1Q8NBU5 361 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 STAG3L4Q8TBR4 150 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 CANT1Q8WVQ1 401 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 MYEOVQ96EZ4 313 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 NSUN5Q96P11 429 aaKnown RBP15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 INIPQ9NRY2 104 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 CCM2LQ9NUG4 571 aaPredicted RBP15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 MKI67P46013 3256 aaKnown RBP15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 ANGPT2O15123 496 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 VPS4BO75351 444 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 MYCP01106 439 aaPredicted RBP15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 HMBSP08397 361 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 TAF10Q12962 218 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 LCP2Q13094 533 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 SPATS1Q496A3 300 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 PITRM1Q5JRX3 1037 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 TRPC4APQ8TEL6 797 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 LRCH3Q96II8 777 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 CIB1Q99828 191 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 TSEN34Q9BSV6 310 aaKnown RBP15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 TRIM15Q9C019 465 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 NLE1Q9NVX2 485 aaPredicted RBP15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 GMPR2Q9P2T1 348 aaKnown RBP15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 POLG2Q9UHN1 485 aa15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 PRG3Q9Y2Y8 225 aaPredicted RBP15.9■□□□□ 0.14
CCHCR1-202ENST00000396263 LCHNA4D1U4 455 aa15.89■□□□□ 0.13
CCHCR1-202ENST00000396263 FXYD1O00168 92 aa15.89■□□□□ 0.13
CCHCR1-202ENST00000396263 HTRA2O43464 458 aaPredicted RBP15.89■□□□□ 0.13
CCHCR1-202ENST00000396263 SLC5A2P31639 672 aa15.89■□□□□ 0.13
CCHCR1-202ENST00000396263 MRPL19P49406 292 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-202ENST00000396263 ZNF140P52738 457 aaPredicted RBP15.89■□□□□ 0.13
CCHCR1-202ENST00000396263 CLCQ05315 142 aa15.89■□□□□ 0.13
CCHCR1-202ENST00000396263 FOXM1Q08050 763 aa15.89■□□□□ 0.13
CCHCR1-202ENST00000396263 BNIP2Q12982 314 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms