RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 DCAKDQ8WVC6 231 aa11.41□□□□□ -0.58
RTN1-203ENST00000395090 UCMAQ8WVF2 138 aa11.41□□□□□ -0.58
RTN1-203ENST00000395090 ZNF669Q96BR6 464 aaPredicted RBP11.41□□□□□ -0.58
RTN1-203ENST00000395090 TLCD1Q96CP7 247 aa11.41□□□□□ -0.58
RTN1-203ENST00000395090 RMDN1Q96DB5 314 aa11.41□□□□□ -0.58
RTN1-203ENST00000395090 ANAPC16Q96DE5 110 aa11.41□□□□□ -0.58
RTN1-203ENST00000395090 CERS2Q96G23 380 aa11.41□□□□□ -0.58
RTN1-203ENST00000395090 SHDQ96IW2 340 aa11.41□□□□□ -0.58
RTN1-203ENST00000395090 ATP6V1G3Q96LB4 118 aa11.41□□□□□ -0.58
RTN1-203ENST00000395090 SRPK1Q96SB4 655 aaKnown RBP11.41□□□□□ -0.58
RTN1-203ENST00000395090 C19orf43Q9BQ61 176 aa11.41□□□□□ -0.58
RTN1-203ENST00000395090 HEPHQ9BQS7 1158 aa11.41□□□□□ -0.58
RTN1-203ENST00000395090 HACD3Q9P035 362 aa11.41□□□□□ -0.58
RTN1-203ENST00000395090 THAP10Q9P2Z0 257 aaPredicted RBP11.41□□□□□ -0.58
RTN1-203ENST00000395090 ZNF180Q9UJW8 692 aa11.41□□□□□ -0.58
RTN1-203ENST00000395090 ADAM30Q9UKF2 790 aa11.41□□□□□ -0.58
RTN1-203ENST00000395090 KIAA1549LQ6ZVL6 1849 aa11.41□□□□□ -0.58
RTN1-203ENST00000395090 MIA3Q5JRA6 1907 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 HMGB1P1B2RPK0 211 aaPredicted RBP11.4□□□□□ -0.58
RTN1-203ENST00000395090 POC1B-GALNT4F8VUJ3 575 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 RGS16O15492 202 aaPredicted RBP11.4□□□□□ -0.58
RTN1-203ENST00000395090 PIAS1O75925 651 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 PIGNO95427 931 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 APODP05090 189 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 MSH2P43246 934 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 RECQLP46063 649 aaPredicted RBP11.4□□□□□ -0.58
RTN1-203ENST00000395090 ZNF234Q14588 700 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 EFTUD2Q15029 972 aaKnown RBP eCLIP11.4□□□□□ -0.58
RTN1-203ENST00000395090 E2F5Q15329 346 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 TAF1AQ15573 450 aaPredicted RBP11.4□□□□□ -0.58
RTN1-203ENST00000395090 HABP4Q5JVS0 413 aaKnown RBP11.4□□□□□ -0.58
RTN1-203ENST00000395090 C9orf64Q5T6V5 341 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 PDPK2PQ6A1A2 396 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 KIAA0930Q6ICG6 404 aaPredicted RBP11.4□□□□□ -0.58
RTN1-203ENST00000395090 MARK2Q7KZI7 788 aaKnown RBP11.4□□□□□ -0.58
RTN1-203ENST00000395090 SLC26A11Q86WA9 606 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 RALGPS2Q86X27 583 aaPredicted RBP11.4□□□□□ -0.58
RTN1-203ENST00000395090 ZSWIM9Q86XI8 627 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 CNPY4Q8N129 248 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 LPCAT1Q8NF37 534 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 MDGA1Q8NFP4 955 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 OR13J1Q8NGT2 312 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 STYXQ8WUJ0 223 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 PDCD6IPQ8WUM4 868 aaKnown RBP11.4□□□□□ -0.58
RTN1-203ENST00000395090 CDKL2Q92772 493 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 DNASE1L2Q92874 299 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 UBL7Q96S82 380 aaPredicted RBP11.4□□□□□ -0.58
RTN1-203ENST00000395090 LYSMD1Q96S90 227 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 PAFAH2Q99487 392 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 P2RY13Q9BPV8 354 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 TRABDQ9H4I3 376 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.4□□□□□ -0.58
RTN1-203ENST00000395090 SLC2A6Q9UGQ3 507 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 PHTF1Q9UMS5 762 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 SPO11Q9Y5K1 396 aa11.4□□□□□ -0.58
RTN1-203ENST00000395090 A0A0J9YYE9 177 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 EDDM13A0A1B0GTR0 161 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 K7EQS6 105 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 AURKAO14965 403 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 NPC1O15118 1278 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 CRTAMO95727 393 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 TRBC1P01850 177 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 ERVK-10P10266 1014 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 GLULP15104 373 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 PAMP19021 973 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 CDKN3Q16667 212 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 SKIDA1Q1XH10 827 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 TMEM201Q5SNT2 666 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 TEDDM1Q5T9Z0 273 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 EMC10Q5UCC4 262 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 GDPD4Q6W3E5 623 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 CNTN4Q8IWV2 1026 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 KRT222Q8N1A0 295 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 BLOC1S5Q8TDH9 187 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 PPM1EQ8WY54 764 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 SCRN2Q96FV2 425 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 FAM46AQ96IP4 442 aaKnown RBP11.39□□□□□ -0.59
RTN1-203ENST00000395090 OSBPL1AQ9BXW6 950 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 STMN4Q9H169 189 aaPredicted RBP11.39□□□□□ -0.59
RTN1-203ENST00000395090 MTG2Q9H4K7 406 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 C8orf33Q9H7E9 229 aaPredicted RBP11.39□□□□□ -0.59
RTN1-203ENST00000395090 PSMC3IPQ9P2W1 217 aaPredicted RBP11.39□□□□□ -0.59
RTN1-203ENST00000395090 DKK3Q9UBP4 350 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 CTNNAL1Q9UBT7 734 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 ARL5AQ9Y689 179 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 ANKRD36A6QL64 1941 aa11.39□□□□□ -0.59
RTN1-203ENST00000395090 TSPAN11A1L157 253 aa11.38□□□□□ -0.59
RTN1-203ENST00000395090 KRBA1A5PL33 1030 aa11.38□□□□□ -0.59
RTN1-203ENST00000395090 SMIM23A6NLE4 172 aa11.38□□□□□ -0.59
RTN1-203ENST00000395090 C2orf81A6NN90 581 aa11.38□□□□□ -0.59
RTN1-203ENST00000395090 SPECC1L-ADORA2AF8WAN1 911 aa11.38□□□□□ -0.59
RTN1-203ENST00000395090 SLC7A4O43246 635 aa11.38□□□□□ -0.59
RTN1-203ENST00000395090 FAM155BO75949 473 aa11.38□□□□□ -0.59
RTN1-203ENST00000395090 VAPBO95292 243 aa11.38□□□□□ -0.59
RTN1-203ENST00000395090 PRKCGP05129 697 aa11.38□□□□□ -0.59
RTN1-203ENST00000395090 CTSLP07711 333 aa11.38□□□□□ -0.59
RTN1-203ENST00000395090 PIRTP0C851 137 aa11.38□□□□□ -0.59
RTN1-203ENST00000395090 OAS2P29728 719 aaKnown RBP11.38□□□□□ -0.59
RTN1-203ENST00000395090 HMGCLP35914 325 aa11.38□□□□□ -0.59
RTN1-203ENST00000395090 KIR2DL1P43626 348 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms