RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 PCDH12Q9NPG4 1184 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 QSOX1O00391 747 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 SLC9A3R1O14745 358 aaPredicted RBP17.14■□□□□ 0.33
SIN3A-203ENST00000394949 MFSD11O43934 449 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 ITGAXP20702 1163 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 HTR7P34969 479 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 MFSD4BQ5TF39 518 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 MOSPD2Q8NHP6 518 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 SUCOQ9UBS9 1254 aaKnown RBP17.14■□□□□ 0.33
SIN3A-203ENST00000394949 U3KQV3 271 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 TCHHQ07283 1943 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 BUD23O43709 281 aaKnown RBP17.14■□□□□ 0.33
SIN3A-203ENST00000394949 FTH1P02794 183 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 SLC6A2P23975 617 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 MRPS6P82932 125 aaKnown RBP17.14■□□□□ 0.33
SIN3A-203ENST00000394949 MAP2K5Q13163 448 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 DRAXINQ8NBI3 349 aaPredicted RBP17.14■□□□□ 0.33
SIN3A-203ENST00000394949 MRPS7Q9Y2R9 242 aaKnown RBP17.14■□□□□ 0.33
SIN3A-203ENST00000394949 SERPINB7O75635 380 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 RGS20O76081 388 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 CHRNGP07510 517 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 CXCR2P25025 360 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 ABATP80404 500 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 TATDN1Q6P1N9 297 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 DCLRE1AQ6PJP8 1040 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 TRPV1Q8NER1 839 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 CITED4Q96RK1 184 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 HIPK3Q9H422 1215 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 PREBQ9HCU5 417 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 CARD8Q9Y2G2 431 aa17.14■□□□□ 0.33
SIN3A-203ENST00000394949 UBXN8O00124 270 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 AP5B1Q2VPB7 878 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 HECTD3Q5T447 861 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 C16orf62Q7Z3J2 963 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 SLC34A3Q8N130 599 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 TOP6BLQ8N6T0 577 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 C12orf29Q8N999 325 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 KCTD15Q96SI1 283 aaPredicted RBP17.13■□□□□ 0.33
SIN3A-203ENST00000394949 NUSAP1Q9BXS6 441 aaKnown RBP17.13■□□□□ 0.33
SIN3A-203ENST00000394949 FTHL17Q9BXU8 183 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 PDGFDQ9GZP0 370 aaPredicted RBP17.13■□□□□ 0.33
SIN3A-203ENST00000394949 EHD1Q9H4M9 534 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 CHRAC1Q9NRG0 131 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 ZNF232Q9UNY5 417 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 BCL9LQ86UU0 1499 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 KLHL33A6NCF5 533 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 KPNA3O00505 521 aaPredicted RBP17.13■□□□□ 0.33
SIN3A-203ENST00000394949 PGRMC2O15173 223 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 TMEM63AO94886 807 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 FABP3P05413 133 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 SMIM10L2AP0DMW4 78 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 SMIM10L2BP0DMW5 78 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 GMFBP60983 142 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 POU5F1Q01860 360 aaKnown RBP17.13■□□□□ 0.33
SIN3A-203ENST00000394949 GALNT3Q14435 633 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 RELL1Q8IUW5 271 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 CSH1P0DML2 217 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 CSH2P0DML3 217 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 HKDC1Q2TB90 917 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 PHF12Q96QT6 1004 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 LYVE1Q9Y5Y7 322 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 ANKDD1BA6NHY2 528 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 CASKO14936 926 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 RAP2AP10114 183 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 UROSP10746 265 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 POLR2EP19388 210 aaKnown RBP17.13■□□□□ 0.33
SIN3A-203ENST00000394949 SEMA5AQ13591 1074 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 CA9Q16790 459 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 GATAD2AQ86YP4 633 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 CCDC36Q8IYA8 594 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 TEX47Q8TBZ9 253 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 ZNF607Q96SK3 696 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 KIFC1Q9BW19 673 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 NFKBIZQ9BYH8 718 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 SPG21Q9NZD8 308 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 PHF11Q9UIL8 331 aa17.13■□□□□ 0.33
SIN3A-203ENST00000394949 PRG2P13727 222 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 CLCN2P51788 898 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 SLC18A2Q05940 514 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 ZNF829Q3KNS6 432 aaPredicted RBP17.12■□□□□ 0.33
SIN3A-203ENST00000394949 ZNF558Q96NG5 402 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 RASSF1Q9NS23 344 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 DNAJB9Q9UBS3 223 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 TDRKHQ9Y2W6 561 aaKnown RBP17.12■□□□□ 0.33
SIN3A-203ENST00000394949 ANKRD26Q9UPS8 1709 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 UGT1A9O60656 530 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 RPP40O75818 363 aaKnown RBP17.12■□□□□ 0.33
SIN3A-203ENST00000394949 UGT1A6P19224 532 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 UGT1A1P22309 533 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 UGT1A4P22310 534 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 UGT1A3P35503 534 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 UGT1A5P35504 534 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 FKBP1BP68106 108 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 RALGPS2Q86X27 583 aaPredicted RBP17.12■□□□□ 0.33
SIN3A-203ENST00000394949 IPCEF1Q8WWN9 437 aaPredicted RBP17.12■□□□□ 0.33
SIN3A-203ENST00000394949 C1QTNF7Q9BXJ2 289 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 UGT1A7Q9HAW7 530 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 UGT1A10Q9HAW8 530 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 UGT1A8Q9HAW9 530 aa17.12■□□□□ 0.33
SIN3A-203ENST00000394949 GUCA1AP43080 201 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms