RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 CPNE1Q99829 537 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 RTKNQ9BST9 563 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 C2orf49Q9BVC5 232 aaPredicted RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 TRIM54Q9BYV2 358 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 EML4Q9HC35 981 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 GLOD4Q9HC38 313 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 TOR4AQ9NXH8 423 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 ATPIF1Q9UII2 106 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 TLR6Q9Y2C9 796 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 WBP11Q9Y2W2 641 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 KANSL1LA0AUZ9 987 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 M0QZQ0 153 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 ZNF197O14709 1029 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 SLC9A3R1O14745 358 aaPredicted RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 SNAP91O60641 907 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 TMCC2O75069 709 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 AVILO75366 819 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 BEST1O76090 585 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 RHOBTB1O94844 696 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 VAPBO95292 243 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 FCGR1AP12314 374 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 IFI30P13284 250 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 PRKACAP17612 351 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 CD86P42081 329 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 SLC9A3P48764 834 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 CXCR3P49682 368 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 ILF2Q12905 390 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 LRP8Q14114 963 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 PARP15Q460N3 678 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 AARS2Q5JTZ9 985 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 PTRHD1Q6GMV3 140 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 PSRC1Q6PGN9 363 aaPredicted RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 SLC22A16Q86VW1 577 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 COLGALT2Q8IYK4 626 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 OFCC1Q8IZS5 231 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 ACTRT2Q8TDY3 377 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 RAB2BQ8WUD1 216 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 ACAT2Q9BWD1 397 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 EPB41L4BQ9H329 900 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 TOR3AQ9H497 397 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 STN1Q9H668 368 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 FANCEQ9HB96 536 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 NEK6Q9HC98 313 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 SSU72Q9NP77 194 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 THG1LQ9NWX6 298 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 CDC14AQ9UNH5 594 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 RUVBL2Q9Y230 463 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 ACOT9Q9Y305 439 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 SIPA1L1O43166 1804 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 LOXHD1Q8IVV2 1947 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 A8MU76 341 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 CENPBD1B2RD01 187 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 TFECO14948 347 aaPredicted RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 DENRO43583 198 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 CLPXO76031 633 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 LDLRP01130 860 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 MPOP05164 745 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 HAPLN1P10915 354 aaPredicted RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 CHRM3P20309 590 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 CES1P23141 567 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 CORO1AP31146 461 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 GDF10P55107 478 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 PRKD1Q15139 912 aaPredicted RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 TYSND1Q2T9J0 566 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 AGAP9Q5VTM2 703 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 STK32CQ86UX6 486 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 DSELQ8IZU8 1212 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 CFAP52Q8N1V2 620 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 RTL3Q8N8U3 475 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 BANPQ8N9N5 519 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 LPCAT1Q8NF37 534 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 MCFD2Q8NI22 146 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 TRUB1Q8WWH5 349 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 LRTOMTQ8WZ04 291 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 ELMO1Q92556 727 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 MTERF3Q96E29 417 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 IGSF21Q96ID5 467 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 PIWIL1Q96J94 861 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 PEBP4Q96S96 227 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 TMEM209Q96SK2 561 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 SEMA3CQ99985 751 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 CIPCQ9C0C6 399 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 GBA3Q9H227 469 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 C1orf21Q9H246 121 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 PNPOQ9NVS9 261 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 MRPS23Q9Y3D9 190 aaKnown RBP5.67□□□□□ -1.5
RFFL-202ENST00000394597 SESN1Q9Y6P5 492 aa5.67□□□□□ -1.5
RFFL-202ENST00000394597 ATAD5Q96QE3 1844 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 ARFGEF1Q9Y6D6 1849 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 MTMR11A4FU01 709 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 ZNF487B1APH4 448 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 E7ENX8 843 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 MATN3O15232 486 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 TBX1O43435 398 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 LZTS3O60299 673 aaPredicted RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 OAZ2O95190 189 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 DLDP09622 509 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 ERVK-10P10266 1014 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 MZF1P28698 734 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms