RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 ENPEPQ07075 957 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 RBM48Q5RL73 367 aaKnown RBP12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 CES5AQ6NT32 575 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 C1orf186Q6ZWK4 172 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 ZNF677Q86XU0 584 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 MCOLN3Q8TDD5 553 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 MFSD3Q96ES6 412 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 OSGIN1Q9UJX0 560 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 DNMT3AQ9Y6K1 912 aaPredicted RBP12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 ZFC3H1O60293 1989 aaKnown RBP12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 LDLRP01130 860 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 BMP1P13497 986 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 FMO3P31513 532 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 ERVFC1P60507 584 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 ERVK-8P63133 956 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 MFSD10Q14728 455 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 TRIM60Q495X7 471 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 XXYLT1Q8NBI6 393 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 TRPV3Q8NET8 790 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 OR52H1Q8NGJ2 320 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 ZNF668Q96K58 619 aaPredicted RBP12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 MYRFLQ96LU7 910 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 TRNT1Q96Q11 434 aaKnown RBP12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 PPP1R16BQ96T49 567 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 LXNQ9BS40 222 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 SORBS1Q9BX66 1292 aaKnown RBP12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 FAM49AQ9H0Q0 323 aaPredicted RBP12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 INTS7Q9NVH2 962 aaKnown RBP12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 TNFRSF10DQ9UBN6 386 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 USP22Q9UPT9 525 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 DICER1Q9UPY3 1922 aaKnown RBP12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 FER1L6Q2WGJ9 1857 aa12.48□□□□□ -0.41
SLC28A1-203ENST00000394573 SLC1A7O00341 560 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 GLAP06280 429 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 KCNA6P17658 529 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 KCNA5P22460 613 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 KLRK1P26718 216 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 CSTF2P33240 577 aaKnown RBP eCLIP12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 SP2Q02086 613 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 STX5Q13190 355 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 ELOAQ14241 798 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 ZBTB41Q5SVQ8 909 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 TAF2Q6P1X5 1199 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 LINC00299Q6ZSB3 139 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 CAMKK1Q8N5S9 505 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 PTERQ96BW5 349 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 MAGEB10Q96LZ2 347 aaPredicted RBP12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 RNF145Q96MT1 663 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 CAMKK2Q96RR4 588 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 SLC6A17Q9H1V8 727 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 PCOLCE2Q9UKZ9 415 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 OGDHLQ9ULD0 1010 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 RAP2CQ9Y3L5 183 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 ATP6AP2A0A1C7CYW4 349 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 CCDC182A6NF36 153 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 TMEM191CA6NGB0 347 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 LINC00587B1AMM8 73 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 WWP2O00308 870 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 ARPC2O15144 300 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 FGF18O76093 207 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 ERVK-10P10266 1014 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 THRBP10828 461 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 CD36P16671 472 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 RFX2P48378 723 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 CCT3P49368 545 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 SCNN1GP51170 649 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 MAP2K6P52564 334 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 ARSFP54793 590 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 TRIP4Q15650 581 aaPredicted RBP12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 ARMC4Q5T2S8 1044 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 ARHGEF16Q5VV41 709 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 KRT39Q6A163 491 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 PPP1R18Q6NYC8 613 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 TMEM270Q6UE05 265 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 ZNF704Q6ZNC4 412 aaPredicted RBP12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 TIFABQ6ZNK6 161 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 RPS27LQ71UM5 84 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 COMMD7Q86VX2 200 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 RIOX2Q8IUF8 465 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 MCUQ8NE86 351 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 ST8SIA4Q92187 359 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 B3GALT6Q96L58 329 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 RIOX1Q9H6W3 641 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 IFT46Q9NQC8 304 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 CDK5RAP2Q96SN8 1893 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 KIF1AQ12756 1690 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 LOC100506127A0A0U1RQW1 187 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 METTL15A6NJ78 407 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 LOC110117498-PIK3R3F6TDL0 507 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 ATP6AP2O75787 350 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 IFNA14P01570 189 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 POU1F1P28069 291 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 CLK2P49760 499 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 TRIM28Q13263 835 aaKnown RBP12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 PDK2Q15119 407 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 NFIL3Q16649 462 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 UGP2Q16851 508 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 DNAJC24Q6P3W2 148 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 ZNF767PQ75MW2 155 aa12.47□□□□□ -0.41
SLC28A1-203ENST00000394573 RETREG3Q86VR2 466 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms