RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 ACVRL1P37023 503 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 HSPA9P38646 679 aaKnown RBP11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 MAGEA6P43360 314 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 PDX1P52945 283 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 ARL4CP56559 192 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 SEMA5AQ13591 1074 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 SPIDRQ14159 915 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 KCNJ11Q14654 390 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 CASP8Q14790 479 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 TPSAB1Q15661 275 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 POM121L1PQ3SYA9 428 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 FHL5Q5TD97 284 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 TMCO4Q5TGY1 634 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 MARC1Q5VT66 337 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 CRYBG3Q68DQ2 2970 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 CXorf57Q6NSI4 855 aaKnown RBP11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 RAB11FIP2Q7L804 512 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 MFN1Q8IWA4 741 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 PDIK1LQ8N165 341 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 NAT8LQ8N9F0 302 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 KDM1BQ8NB78 822 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 MCUQ8NE86 351 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 OR7D4Q8NG98 312 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 FIBINQ8TAL6 211 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 TTC17Q96AE7 1141 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 GDAP1L1Q96MZ0 367 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 CEP41Q9BYV8 373 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 GBA3Q9H227 469 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 GLOD4Q9HC38 313 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 ATP13A1Q9HD20 1204 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 RSPH14Q9UHP6 348 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 PCDHB11Q9Y5F2 797 aa11.07□□□□□ -0.64
VTI1BP2-201ENST00000394154 A0A0D9SEW6 157 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 EDDM13A0A1B0GTR0 161 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 ERI2A8K979 691 aaKnown RBP11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 J3KR12 359 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 EIF3HO15372 352 aaKnown RBP eCLIP11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 PLRG1O43660 514 aaKnown RBP11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 ANXA9O76027 345 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 PSMB4P28070 264 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 CD70P32970 193 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 MMP13P45452 471 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 PMS2P54278 862 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 HNRNPKP61978 463 aaKnown RBP eCLIP11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 ZBTB17Q13105 803 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 SLC12A1Q13621 1099 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 RFTN1Q14699 578 aaPredicted RBP11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 LBRQ14739 615 aaKnown RBP11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 NR0B2Q15466 257 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 HIF1AQ16665 826 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 KRTAP21-3Q3LHN1 58 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 FAXCQ5TGI0 409 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 ANKRD22Q5VYY1 191 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 ZNF787Q6DD87 383 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 CRTC1Q6UUV9 634 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 CENPUQ71F23 418 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 TRMT10CQ7L0Y3 403 aaKnown RBP11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 TMC3Q7Z5M5 1100 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 TMEM145Q8NBT3 493 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 FAM131CQ96AQ9 280 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 RBM15Q96T37 977 aaKnown RBP eCLIP11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 FAM129BQ96TA1 746 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 FEM1AQ9BSK4 669 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 FUT8Q9BYC5 575 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 PHACTR1Q9C0D0 580 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 STRADBQ9C0K7 418 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 ACBD3Q9H3P7 528 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 VIPAS39Q9H9C1 493 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 XAB2Q9HCS7 855 aaKnown RBP11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 EIF2B3Q9NR50 452 aaKnown RBP11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 UBA2Q9UBT2 640 aaPredicted RBP11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 CA5BQ9Y2D0 317 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 ATP8A1Q9Y2Q0 1164 aa11.06□□□□□ -0.64
VTI1BP2-201ENST00000394154 TCRBV7S3A2A0A539 114 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 TMX2-CTNND1H3BSU7 103 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 GOLGA8MH3BSY2 632 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 IL1BP01584 269 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 PYGBP11216 843 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 NFKB1P19838 968 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 MZF1P28698 734 aaPredicted RBP11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 CD68P34810 354 aaPredicted RBP11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 DRD3P35462 400 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 GEMP55040 296 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 RP1P56715 2156 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 GEMIN4P57678 1058 aaKnown RBP11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 ITKQ08881 620 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 ZNF235Q14590 738 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 DNAJC21Q5F1R6 531 aaKnown RBP11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 FSCBQ5H9T9 825 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 FAM182AQ5T1J6 154 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 CFAP58Q5T655 872 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 ALS2CLQ60I27 953 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 TEX26Q8N6G2 289 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 CNTD1Q8N815 330 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 ZNF548Q8NEK5 533 aaPredicted RBP11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 OR52K2Q8NGK3 314 aa11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 C9orf43Q8TAL5 461 aaPredicted RBP11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 UBLCP1Q8WVY7 318 aaPredicted RBP11.05□□□□□ -0.64
VTI1BP2-201ENST00000394154 NAT6Q93015 286 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms