RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 AGTR2P50052 363 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 FAM219BQ5XKK7 198 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 DDX53Q86TM3 631 aaKnown RBP18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 NR1H4Q96RI1 486 aaPredicted RBP18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 TBCDQ9BTW9 1192 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 MRPL17Q9NRX2 175 aaKnown RBP18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 IGSF5Q9NSI5 407 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 TREX1Q9NSU2 369 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 CNPP09543 421 aaKnown RBP18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 CPOXP36551 454 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 LCP2Q13094 533 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 GSTA3Q16772 222 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 AP1ARQ63HQ0 302 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 TMEM173Q86WV6 379 aaPredicted RBP18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 RNF145Q96MT1 663 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 CIPCQ9C0C6 399 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 ZDHHC6Q9H6R6 413 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 C15orf38-AP3S2A0A0A6YYH1 394 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 C2orf78A6NCI8 922 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 PRMT5O14744 637 aaPredicted RBP18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 ECI2O75521 394 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 TRIM25Q14258 630 aaKnown RBP18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 IL23RQ5VWK5 629 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 ARPINQ7Z6K5 226 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 DNAJB7Q7Z6W7 309 aaPredicted RBP18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 UNC93B1Q9H1C4 597 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 NOL6Q9H6R4 1146 aaKnown RBP18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 SLC8A2Q9UPR5 921 aa18.71■□□□□ 0.59
SMARCC2-203ENST00000394023 HSPA1AP0DMV8 641 aaKnown RBP18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 HSPA1BP0DMV9 641 aaKnown RBP18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 STC1P52823 247 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 CYP4F8P98187 520 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 SMARCB1Q12824 385 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 TTLL9Q3SXZ7 439 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 MRM3Q9HC36 420 aaKnown RBP18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 PKD2L2Q9NZM6 624 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 CFAP97Q9P2B7 532 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 MUSKO15146 869 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 SEC22BO75396 215 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 BEND5Q7L4P6 421 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 EEF1AKMT1Q8WVE0 214 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 AARSD1Q9BTE6 412 aaKnown RBP18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 GPR39O43194 453 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 PRAMEF1O95521 474 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 ADRA1AP35348 466 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 MTA1Q13330 715 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 ZNF678Q5SXM1 525 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 TTC33Q6PID6 262 aaPredicted RBP18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 ISCA2Q86U28 154 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 CRISPLD1Q9H336 500 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 ZFYVE1Q9HBF4 777 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 SPO11Q9Y5K1 396 aa18.7■□□□□ 0.58
SMARCC2-203ENST00000394023 ANKRD66B4E2M5 251 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 SLC25A14O95258 325 aaPredicted RBP18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 ZNF37AP17032 561 aaPredicted RBP18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 FASP25445 335 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 MZF1P28698 734 aaPredicted RBP18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 HSPA7P48741 367 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 FAM91A1Q658Y4 838 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 RALGPS2Q86X27 583 aaPredicted RBP18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 FIG4Q92562 907 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 CCDC138Q96M89 665 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 PPM1MQ96MI6 270 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 PARP14Q460N5 1801 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 PFKPQ01813 784 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 CPSF6Q16630 551 aaKnown RBP eCLIP18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 PGBD5Q8N414 524 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 HJURPQ8NCD3 748 aaPredicted RBP18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 MIPOL1Q8TD10 442 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 PTERQ96BW5 349 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 MYO19Q96H55 970 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 PKP2Q99959 881 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 EIF3LQ9Y262 564 aaKnown RBP18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 PCNAP12004 261 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 CSKP41240 450 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 RGRP47804 291 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 CCNHP51946 323 aaPredicted RBP18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 CREB5Q02930 508 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 TUBB3Q13509 450 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 TAF1AQ15573 450 aaPredicted RBP18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 LYSMD3Q7Z3D4 306 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 SLC39A13Q96H72 371 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 ARL15Q9NXU5 204 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 OPTCQ9UBM4 332 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 YIPF1Q9Y548 306 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 PAPSS2O95340 614 aaPredicted RBP18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 MLYCDO95822 493 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 IGSF6O95976 241 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 SLC6A4P31645 630 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 RPL38P63173 70 aaKnown RBP18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 NRG1Q02297 640 aaPredicted RBP18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 ITIH5Q86UX2 942 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 LSMEM2Q8N112 164 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 CLHC1Q8NHS4 586 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 HAUS8Q9BT25 410 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 C1QTNF1Q9BXJ1 281 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 ADNPQ9H2P0 1102 aa18.69■□□□□ 0.58
SMARCC2-203ENST00000394023 NCK1P16333 377 aa18.68■□□□□ 0.58
SMARCC2-203ENST00000394023 CKMT2P17540 419 aa18.68■□□□□ 0.58
SMARCC2-203ENST00000394023 ADSLP30566 484 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms