RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PKD2L2Q9NZM6 624 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.59□□□□□ -1.03
TDP1-203ENST00000393454 CD207Q9UJ71 328 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 MTF2Q9Y483 593 aaPredicted RBP8.59□□□□□ -1.03
TDP1-203ENST00000393454 KIAA1549LQ6ZVL6 1849 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 SCN8AQ9UQD0 1980 aa8.59□□□□□ -1.03
TDP1-203ENST00000393454 A0A0G2JND7 137 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 GAPDHSO14556 408 aaPredicted RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 PRMT5O14744 637 aaPredicted RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 TRIM13O60858 407 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 EPHX1P07099 455 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 RBP1P09455 135 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 ZNF7P17097 686 aaPredicted RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 TFEBP19484 476 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 GRK2P25098 689 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 IL12RB1P42701 662 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 WASP42768 502 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 SPINT3P49223 89 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 PTPN5P54829 565 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 TIAL1Q01085 375 aaKnown RBP eCLIP8.58□□□□□ -1.04
TDP1-203ENST00000393454 ACAP2Q15057 778 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 GPR33Q49SQ1 333 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 CTSL3PQ5NE16 218 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 LYPLAL1Q5VWZ2 237 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 PTRHD1Q6GMV3 140 aaKnown RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 PAQR3Q6TCH7 311 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 CCDC121Q6ZUS5 278 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 KDM1BQ8NB78 822 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 SMRP1Q8NCR6 262 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 RFWD2Q8NHY2 731 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 PIP4K2CQ8TBX8 421 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 HCAR2Q8TDS4 363 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 C7orf26Q96N11 449 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 C19orf43Q9BQ61 176 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 PLCD4Q9BRC7 762 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 SPATA16Q9BXB7 569 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 ABCG8Q9H221 673 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 PRO3102Q9H379 93 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 ALG9Q9H6U8 611 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 POPDC3Q9HBV1 291 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 SYTL2Q9HCH5 934 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 OXSMQ9NWU1 459 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 CACNA2D2Q9NY47 1150 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 DKK3Q9UBP4 350 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 MARCOQ9UEW3 520 aaPredicted RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 SUN2Q9UH99 717 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 TRMT6Q9UJA5 497 aaKnown RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 SARDHQ9UL12 918 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 BRWD1Q9NSI6 2320 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 TCF20Q9UGU0 1960 aaKnown RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 DENND4AQ7Z401 1863 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 COL4A3Q01955 1670 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 TSPAN11A1L157 253 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 ANTXRLA6NF34 631 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 ITM2AO43736 263 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 DLX3O60479 287 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 SNNO75324 88 aaPredicted RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 HSPA4LO95757 839 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 ESR1P03372 595 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 SBK3P0C264 359 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 ZNF37AP17032 561 aaPredicted RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 ZNF30P17039 623 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 ITGB6P18564 788 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 ACRV1P26436 265 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 CA5AP35218 305 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 SLC26A3P40879 764 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 EIF2DP41214 584 aaKnown RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 GALK1P51570 392 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 SEC13P55735 322 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 ABCE1P61221 599 aaKnown RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 OCRLQ01968 901 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 ELAVL3Q14576 367 aaKnown RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 ACOX1Q15067 660 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 AAK1Q2M2I8 961 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 TECRLQ5HYJ1 363 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 ZDHHC20Q5W0Z9 365 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 EGFLAMQ63HQ2 1017 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 FBXL19Q6PCT2 694 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 PARS2Q7L3T8 475 aaKnown RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 RBFAQ8N0V3 343 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 TMEM151AQ8N4L1 468 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 CCNYL1Q8N7R7 359 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 SIDT2Q8NBJ9 832 aaKnown RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 TMIEQ8NEW7 156 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 NAT14Q8WUY8 206 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 EXT2Q93063 718 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 UBXN10Q96LJ8 280 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 ACOX2Q99424 681 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 BOCQ9BWV1 1114 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 C20orf27Q9GZN8 174 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 FBRSL1Q9HCM7 1045 aaKnown RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 ACSS2Q9NR19 701 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 DYRK4Q9NR20 520 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 THAP10Q9P2Z0 257 aaPredicted RBP8.58□□□□□ -1.04
TDP1-203ENST00000393454 EPS15L1Q9UBC2 864 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 GALPQ9UBC7 116 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 PCDHB1Q9Y5F3 818 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 COMMD10Q9Y6G5 202 aa8.58□□□□□ -1.04
TDP1-203ENST00000393454 ZNF106Q9H2Y7 1883 aaKnown RBP8.57□□□□□ -1.04
TDP1-203ENST00000393454 CCT8L1PA6NM43 557 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms