RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 IL17CQ9P0M4 197 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 ZNF711Q9Y462 761 aa19.35■□□□□ 0.69
SSU72-204ENST00000378726 SLC9A3R1O14745 358 aaPredicted RBP19.34■□□□□ 0.69
SSU72-204ENST00000378726 TRIM24O15164 1050 aa19.34■□□□□ 0.69
SSU72-204ENST00000378726 SOCS5O75159 536 aa19.34■□□□□ 0.69
SSU72-204ENST00000378726 NDUFS3O75489 264 aa19.34■□□□□ 0.69
SSU72-204ENST00000378726 LYNP07948 512 aa19.34■□□□□ 0.69
SSU72-204ENST00000378726 ZCCHC18P0CG32 403 aa19.34■□□□□ 0.69
SSU72-204ENST00000378726 BMP1P13497 986 aa19.34■□□□□ 0.69
SSU72-204ENST00000378726 ARRB2P32121 409 aa19.34■□□□□ 0.69
SSU72-204ENST00000378726 CWF19L1Q69YN2 538 aaKnown RBP19.34■□□□□ 0.69
SSU72-204ENST00000378726 LYSMD3Q7Z3D4 306 aa19.34■□□□□ 0.69
SSU72-204ENST00000378726 EID2BQ96D98 161 aa19.34■□□□□ 0.69
SSU72-204ENST00000378726 UBXN10Q96LJ8 280 aa19.34■□□□□ 0.69
SSU72-204ENST00000378726 NR1H4Q96RI1 486 aaPredicted RBP19.34■□□□□ 0.69
SSU72-204ENST00000378726 TCF12Q99081 682 aa19.34■□□□□ 0.69
SSU72-204ENST00000378726 SORT1Q99523 831 aa19.34■□□□□ 0.69
SSU72-204ENST00000378726 MRPL57Q9BQC6 102 aaKnown RBP19.34■□□□□ 0.69
SSU72-204ENST00000378726 MRPL46Q9H2W6 279 aaKnown RBP19.34■□□□□ 0.69
SSU72-204ENST00000378726 FAM96AQ9H5X1 160 aa19.34■□□□□ 0.69
SSU72-204ENST00000378726 PKP3Q9Y446 797 aa19.34■□□□□ 0.69
SSU72-204ENST00000378726 LTA4HP09960 611 aaKnown RBP19.33■□□□□ 0.69
SSU72-204ENST00000378726 SERPINA4P29622 427 aa19.33■□□□□ 0.69
SSU72-204ENST00000378726 HMGCLP35914 325 aa19.33■□□□□ 0.69
SSU72-204ENST00000378726 KPNA2P52292 529 aaKnown RBP19.33■□□□□ 0.69
SSU72-204ENST00000378726 SULT2A1Q06520 285 aa19.33■□□□□ 0.69
SSU72-204ENST00000378726 CDC16Q13042 620 aa19.33■□□□□ 0.69
SSU72-204ENST00000378726 PEX6Q13608 980 aa19.33■□□□□ 0.69
SSU72-204ENST00000378726 DUSP6Q16828 381 aa19.33■□□□□ 0.69
SSU72-204ENST00000378726 TMEM207Q6UWW9 146 aa19.33■□□□□ 0.69
SSU72-204ENST00000378726 MAVSQ7Z434 540 aa19.33■□□□□ 0.69
SSU72-204ENST00000378726 ADIPOR2Q86V24 386 aa19.33■□□□□ 0.69
SSU72-204ENST00000378726 WDR75Q8IWA0 830 aaKnown RBP19.33■□□□□ 0.69
SSU72-204ENST00000378726 ANKRD49Q8WVL7 239 aa19.33■□□□□ 0.69
SSU72-204ENST00000378726 TRAPPC9Q96Q05 1148 aa19.33■□□□□ 0.69
SSU72-204ENST00000378726 GATA5Q9BWX5 397 aaPredicted RBP19.33■□□□□ 0.69
SSU72-204ENST00000378726 A0A0J9YYE9 177 aa19.33■□□□□ 0.68
SSU72-204ENST00000378726 UBA6A0AVT1 1052 aaPredicted RBP19.33■□□□□ 0.68
SSU72-204ENST00000378726 H7C0S8 307 aa19.33■□□□□ 0.68
SSU72-204ENST00000378726 SORBS2O94875 1100 aaKnown RBP19.33■□□□□ 0.68
SSU72-204ENST00000378726 TRBC1P01850 177 aa19.33■□□□□ 0.68
SSU72-204ENST00000378726 FMO4P31512 558 aa19.33■□□□□ 0.68
SSU72-204ENST00000378726 ZRANB3Q5FWF4 1079 aa19.33■□□□□ 0.68
SSU72-204ENST00000378726 LIPMQ5VYY2 423 aa19.33■□□□□ 0.68
SSU72-204ENST00000378726 C22orf39Q6P5X5 142 aa19.33■□□□□ 0.68
SSU72-204ENST00000378726 PIM3Q86V86 326 aa19.33■□□□□ 0.68
SSU72-204ENST00000378726 PIANPQ8IYJ0 282 aa19.33■□□□□ 0.68
SSU72-204ENST00000378726 GALNT15Q8N3T1 639 aa19.33■□□□□ 0.68
SSU72-204ENST00000378726 PBX4Q9BYU1 374 aa19.33■□□□□ 0.68
SSU72-204ENST00000378726 MARK1Q9P0L2 795 aa19.33■□□□□ 0.68
SSU72-204ENST00000378726 PRRC2BQ5JSZ5 2229 aaKnown RBP19.33■□□□□ 0.68
SSU72-204ENST00000378726 DLX3O60479 287 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 H2AFYO75367 372 aaKnown RBP19.32■□□□□ 0.68
SSU72-204ENST00000378726 HOXB8P17481 243 aaPredicted RBP19.32■□□□□ 0.68
SSU72-204ENST00000378726 FDXRP22570 491 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 HNF1BP35680 557 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 TIAL1Q01085 375 aaKnown RBP eCLIP19.32■□□□□ 0.68
SSU72-204ENST00000378726 DMC1Q14565 340 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 CARD16Q5EG05 197 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 PSAPL1Q6NUJ1 521 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 RNF217Q8TC41 542 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 PYDC1Q8WXC3 89 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 MOCOSQ96EN8 888 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 SGF29Q96ES7 293 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 TUBGCP5Q96RT8 1024 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 AARSD1Q9BTE6 412 aaKnown RBP19.32■□□□□ 0.68
SSU72-204ENST00000378726 ZFYVE1Q9HBF4 777 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 S100A14Q9HCY8 104 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 PNPOQ9NVS9 261 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 DUS2Q9NX74 493 aaKnown RBP19.32■□□□□ 0.68
SSU72-204ENST00000378726 WEE1P30291 646 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 VIPR2P41587 438 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 PRKAA2P54646 552 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 ROR2Q01974 943 aaKnown RBP19.32■□□□□ 0.68
SSU72-204ENST00000378726 DHCR24Q15392 516 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 TMEM215Q68D42 235 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 KLC3Q6P597 504 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 RNF111Q6ZNA4 994 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 MYLIPQ8WY64 445 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 LPGAT1Q92604 370 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 VOPP1Q96AW1 172 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 SLC2A11Q9BYW1 496 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 CEP44Q9C0F1 390 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 NKX2-4Q9H2Z4 354 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 PDP2Q9P2J9 529 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 SORCS3Q9UPU3 1222 aa19.32■□□□□ 0.68
SSU72-204ENST00000378726 TMEM114B3SHH9 223 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 FKBP6O75344 327 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 WISP3O95389 354 aaPredicted RBP19.31■□□□□ 0.68
SSU72-204ENST00000378726 HSPA4LO95757 839 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 POLR2EP19388 210 aaKnown RBP19.31■□□□□ 0.68
SSU72-204ENST00000378726 SLC26A3P40879 764 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 NAGLUP54802 743 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 POLE2P56282 527 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 XIAPP98170 497 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 ACAP2Q15057 778 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 DPY19L3Q6ZPD9 716 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 ZSWIM9Q86XI8 627 aa19.31■□□□□ 0.68
SSU72-204ENST00000378726 PCDH20Q8N6Y1 951 aaKnown RBP19.31■□□□□ 0.68
SSU72-204ENST00000378726 VN1R2Q8NFZ6 395 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms