RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 C1orf50Q9BV19 199 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 MIEF1Q9NQG6 463 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 TIMM22Q9Y584 194 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 C2orf78A6NCI8 922 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 OR2AG2A6NM03 316 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 PEX1O43933 1283 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 PRNPP04156 253 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 IL4RP24394 825 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 PLOD1Q02809 727 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 PTPRCAPQ14761 206 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 ACAP2Q15057 778 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 ZNF781Q8N8C0 355 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 ASZ1Q8WWH4 475 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 RCN3Q96D15 328 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 MPP4Q96JB8 637 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 TRIM45Q9H8W5 580 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 TOP3BO95985 862 aaKnown RBP14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 ESR1P03372 595 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 OGNP20774 298 aaKnown RBP14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 PTGER3P43115 390 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 ALDH9A1P49189 494 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 ECT2LQ008S8 904 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 SLC34A1Q06495 639 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 MPP2Q14168 576 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 TEAD2Q15562 447 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 UBE2R2Q712K3 238 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 TNIP2Q8NFZ5 429 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 BADQ92934 168 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 TIFAQ96CG3 184 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 SEPHS2Q99611 448 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 YIPF2Q9BWQ6 316 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 MMADHCQ9H3L0 296 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 GIMAP4Q9NUV9 329 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 KCTD5Q9NXV2 234 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 FBXO10Q9UK96 956 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 ZNF831Q5JPB2 1677 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 UBXN8O00124 270 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 RPN2P04844 631 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 S100A3P33764 101 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 OR2AP1Q8NGE2 309 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 ZSCAN18Q8TBC5 510 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 CLPTM1LQ96KA5 538 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 SUV39H2Q9H5I1 410 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 ZNF395Q9H8N7 513 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 COPS7BQ9H9Q2 264 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 ASF1AQ9Y294 204 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 SNX5Q9Y5X3 404 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 CNTRLQ7Z7A1 2325 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 MAFKO60675 156 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 NEK3P51956 506 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 SAMD4BQ5PRF9 694 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 MBLAC2Q68D91 279 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 Q6ZVU0 165 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 LYSMD3Q7Z3D4 306 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 CPA6Q8N4T0 437 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 ZNF317Q96PQ6 595 aaPredicted RBP14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 ACAT2Q9BWD1 397 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 CORO1CQ9ULV4 474 aaPredicted RBP14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 STC2O76061 302 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 WDR47O94967 919 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 ZNF23P17027 643 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 PIK3R1P27986 724 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 KLF10Q13118 480 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 LY6G5CQ5SRR4 150 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 CLEC6AQ6EIG7 209 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 PAQR3Q6TCH7 311 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 FAM124AQ86V42 546 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 MAGEC3Q8TD91 643 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 NSMCE2Q96MF7 247 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 KCTD14Q9BQ13 255 aaPredicted RBP14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 PDP2Q9P2J9 529 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 SNX6Q9UNH7 406 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 KCNE2Q9Y6J6 123 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 KANSL1LA0AUZ9 987 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 TTC36A6NLP5 189 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 MAP3K13O43283 966 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 APODP05090 189 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 ABCB1P08183 1280 aaPredicted RBP14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 MAPK10P53779 464 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 RPL38P63173 70 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 DHFR2Q86XF0 187 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 SYT12Q8IV01 421 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 RAVER1Q8IY67 606 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 THAP11Q96EK4 314 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 HBEGFQ99075 208 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 DCUN1D5Q9BTE7 237 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 KIFC1Q9BW19 673 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 AHSPQ9NZD4 102 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 VPS51Q9UID3 782 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 SLC12A4Q9UP95 1085 aa14.11□□□□□ -0.15
SHROOM1-203ENST00000378679 TBC1D3DA0A087WVF3 549 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 TBC1D3IA0A087WXS9 549 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 TBC1D3EA0A087X179 549 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 TBC1D3KA0A087X1G2 549 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 TBC1D3FA6NER0 549 aaPredicted RBP14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 TBC1D3LB9A6J9 549 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 KDELR3O43731 214 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 NIPSNAP2O75323 286 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 TBC1D3HP0C7X1 549 aa14.1□□□□□ -0.15
SHROOM1-203ENST00000378679 MRPS22P82650 360 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms