RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ATG14Q6ZNE5 492 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 USP43Q70EL4 1123 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 EIF3MQ7L2H7 374 aaKnown RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 ZC3HC1Q86WB0 502 aaKnown RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 SIAH1Q8IUQ4 282 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 HS6ST3Q8IZP7 471 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 SELENOMQ8WWX9 145 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 PRR11Q96HE9 360 aaPredicted RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 TSEN34Q9BSV6 310 aaKnown RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 ZBED2Q9BTP6 218 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 LRRC3Q9BY71 257 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 KAT8Q9H7Z6 458 aaKnown RBP8.74□□□□□ -1.01
PCDH9-202ENST00000377865 ZNF358Q9NW07 568 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 RIPK3Q9Y572 518 aa8.74□□□□□ -1.01
PCDH9-202ENST00000377865 CCL15-CCL14A0A0B4J2E2 113 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 LINC00854A0A1B0GVQ3 168 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 SH3PXD2BA1X283 911 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 PAGE1O75459 146 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ALDH1A1P00352 501 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 GRIA1P42261 906 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ZNF33AQ06730 810 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 CCL15Q16663 113 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 PTPRNQ16849 979 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 CARNMT1Q8N4J0 409 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 PHF21AQ96BD5 680 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 LRRC58Q96CX6 371 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 RDH12Q96NR8 316 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ABHD16BQ9H3Z7 469 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 VPS4AQ9UN37 437 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 IPPQ9Y573 584 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 DLEC1Q9Y238 1755 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ZNF701M0R085 212 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 GRIN3BO60391 1043 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 DLX3O60479 287 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 CLPXO76031 633 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ALDH1A2O94788 518 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 FABP3P05413 133 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 GJB1P08034 283 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 PABPC1P11940 636 aaKnown RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 CYP2B6P20813 491 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 LPOP22079 712 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 MVKQ03426 396 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 PARP15Q460N3 678 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 TMEM198Q66K66 360 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 BORAQ6PGQ7 559 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 CENPIQ92674 756 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 SEMA3CQ99985 751 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ACSS2Q9NR19 701 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 KANSL3Q9P2N6 904 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 HMGXB4Q9UGU5 601 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 PCDHB1Q9Y5F3 818 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 IRGMA1A4Y4 181 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 NDST2P52849 883 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ZNF423Q2M1K9 1284 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ANXA8L1Q5VT79 327 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ESRP1Q6NXG1 681 aaKnown RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 CDHR3Q6ZTQ4 885 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 GLB1L3Q8NCI6 653 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 TRPV3Q8NET8 790 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 CANT1Q8WVQ1 401 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 HDHD2Q9H0R4 259 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 AHSPQ9NZD4 102 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ZIM2Q9NZV7 527 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 MARF1Q9Y4F3 1742 aaKnown RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 A8MT66 165 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 CCNKO75909 580 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ZNF37AP17032 561 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 IFNGR2P38484 337 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 GRIA2P42262 883 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 TAS2R39P59534 338 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 MYBPC3Q14896 1274 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 TAS1R3Q7RTX0 852 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 GPR180Q86V85 440 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 NETO2Q8NC67 525 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 COPS5Q92905 334 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 MRPL48Q96GC5 212 aaKnown RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 AURKBQ96GD4 344 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 CLEC4MQ9H2X3 399 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 DPEP3Q9H4B8 488 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 TRMT13Q9NUP7 481 aaKnown RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 UXTQ9UBK9 157 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 SLC25A13Q9UJS0 675 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ANGPT4Q9Y264 503 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ABCB7O75027 752 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 OR6B1O95007 311 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 FAM163BP0C2L3 166 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 PTX3P26022 381 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 NRLP54845 237 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ARHGEF6Q15052 776 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ARMC12Q5T9G4 340 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 KLHL17Q6TDP4 642 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 UGT2A3Q6UWM9 527 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 TCAIMQ8N3R3 496 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 TSPEARQ8WU66 669 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 KCTD13Q8WZ19 329 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 ITPKCQ96DU7 683 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 OMA1Q96E52 524 aa8.73□□□□□ -1.01
PCDH9-202ENST00000377865 FCRL2Q96LA5 508 aaPredicted RBP8.73□□□□□ -1.01
PCDH9-202ENST00000377865 C12orf42Q96LP6 360 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms