RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 RAD9AQ99638 391 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 SUV39H2Q9H5I1 410 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 DLGAP2Q9P1A6 1054 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 OR2AG2A6NM03 316 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 TOP3BO95985 862 aaKnown RBP14.44□□□□□ -0.1
TCOF1-202ENST00000377797 UGT1A6P19224 532 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 UGT1A1P22309 533 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 UGT1A4P22310 534 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 UGT1A3P35503 534 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 UGT1A5P35504 534 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 METTL21CQ5VZV1 264 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 BEND5Q7L4P6 421 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 LYSMD3Q7Z3D4 306 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 ZBTB2Q8N680 514 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 LEMD2Q8NC56 503 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 NAF1Q96HR8 494 aaKnown RBP14.44□□□□□ -0.1
TCOF1-202ENST00000377797 TSC22D3Q99576 134 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 BATF3Q9NR55 127 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 SLC12A4Q9UP95 1085 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 WNT6Q9Y6F9 365 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 C15orf38-AP3S2A0A0A6YYH1 394 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 C2orf78A6NCI8 922 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 NBNO60934 754 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 PSMG1O95456 288 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 ZNF682O95780 498 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 APODP05090 189 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 ABCB1P08183 1280 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-202ENST00000377797 TEAD2Q15562 447 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 CYP2A13Q16696 494 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 ZBTB49Q6ZSB9 765 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 ARPINQ7Z6K5 226 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 YIPF2Q9BWQ6 316 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 ASF1AQ9Y294 204 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 KCNE2Q9Y6J6 123 aa14.44□□□□□ -0.1
TCOF1-202ENST00000377797 TMEM189-UBE2V1I3L0A0 370 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 CHI3L1P36222 383 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-202ENST00000377797 PAGE2BQ5JRK9 111 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 MBLAC2Q68D91 279 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 PAQR3Q6TCH7 311 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 CMTR2Q8IYT2 770 aaKnown RBP14.43□□□□□ -0.1
TCOF1-202ENST00000377797 DCAF4L2Q8NA75 395 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 SIDT2Q8NBJ9 832 aaKnown RBP14.43□□□□□ -0.1
TCOF1-202ENST00000377797 FIG4Q92562 907 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 REPS1Q96D71 796 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 GPR22Q99680 433 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 LRMDAQ9H2I8 198 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 ZNF395Q9H8N7 513 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-202ENST00000377797 HCSTQ9UBK5 93 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 TTC36A6NLP5 189 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 STC2O76061 302 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 ALBP02768 609 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 RBM20Q5T481 1227 aaKnown RBP14.43□□□□□ -0.1
TCOF1-202ENST00000377797 PPP2R2DQ66LE6 453 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 DNAJB14Q8TBM8 379 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 KLHL4Q9C0H6 718 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 CHRNGP07510 517 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 ELP6Q0PNE2 266 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 PTPRCAPQ14761 206 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 CARD16Q5EG05 197 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 FAM43BQ6ZT52 329 aaPredicted RBP14.43□□□□□ -0.1
TCOF1-202ENST00000377797 OR6Y1Q8NGX8 325 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 OLFM3Q96PB7 478 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 TXLNGYQ9BZA5 131 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 CSNK1G1Q9HCP0 422 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 NIPSNAP2O75323 286 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 MRPS35P82673 323 aaKnown RBP14.43□□□□□ -0.1
TCOF1-202ENST00000377797 CLCQ05315 142 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 XKR6Q5GH73 641 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 UBAP2Q5T6F2 1119 aaKnown RBP14.43□□□□□ -0.1
TCOF1-202ENST00000377797 LRRC74BQ6ZQY2 392 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 RBM15BQ8NDT2 890 aaKnown RBP14.43□□□□□ -0.1
TCOF1-202ENST00000377797 RTP4Q96DX8 246 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 GON4LQ3T8J9 2241 aa14.43□□□□□ -0.1
TCOF1-202ENST00000377797 EPOP01588 193 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 FGFR3P22607 806 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 HSPA7P48741 367 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 CNTN1Q12860 1018 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 WLSQ5T9L3 541 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 ZNF621Q6ZSS3 439 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 Q6ZVU0 165 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 ULK2Q8IYT8 1036 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 C19orf60Q96EN9 201 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 CNBD2Q96M20 576 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 MTMR10Q9NXD2 777 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 VPS51Q9UID3 782 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 FBXO10Q9UK96 956 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 GSC2O15499 205 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 STK16O75716 305 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 ALDH1A2O94788 518 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 PSMD8P48556 350 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 DSC3Q14574 896 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 XKR4Q5GH76 650 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 ZNF366Q8N895 744 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 IMP4Q96G21 291 aaKnown RBP14.42□□□□□ -0.1
TCOF1-202ENST00000377797 PSKH2Q96QS6 385 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 DNAJC28Q9NX36 388 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 LRRC37AA6NMS7 1700 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 LEFTY2O00292 366 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 TYROBPO43914 113 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 KRT36O76013 467 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms