RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 TPD52L2O43399 206 aaKnown RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 POP4O95707 220 aaKnown RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 HOXB8P17481 243 aaPredicted RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 CREB5Q02930 508 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 GRB14Q14449 540 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 FAM20CQ8IXL6 584 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 POC5Q8NA72 575 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 PSMA8Q8TAA3 256 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 ITFG1Q8TB96 612 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 AP2M1Q96CW1 435 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 FCRL2Q96LA5 508 aaPredicted RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 DPYSL5Q9BPU6 564 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 KLHL1Q9NR64 748 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 EVLQ9UI08 416 aaPredicted RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 SNX10Q9Y5X0 201 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 hCG_1818297A0A087WSY0 165 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 SMIM31A0A1B0GVY4 71 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 MLYCDO95822 493 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 CYP1A1P04798 512 aaPredicted RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 PABPC1P11940 636 aaKnown RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 MMP8P22894 467 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 ITPKBP27987 946 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 GP5P40197 560 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 SKIV2L2P42285 1042 aaKnown RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 KLHL12Q53G59 568 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 SH3PXD2AQ5TCZ1 1133 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 ZDHHC13Q8IUH4 622 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 IL22RA1Q8N6P7 574 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 FNDC5Q8NAU1 212 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 PHC3Q8NDX5 983 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 OR7A2PQ8NGA2 310 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 RNF39Q9H2S5 420 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 MID1IP1Q9NPA3 183 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 PRKAB1Q9Y478 270 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 ZNF780BQ9Y6R6 833 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 ALS2Q96Q42 1657 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 HCRTO43612 131 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 C22orf31O95567 290 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 PGAM1P18669 254 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 TACR2P21452 398 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 LRPAP1P30533 357 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 CCNHP51946 323 aaPredicted RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 RPL6Q02878 288 aaKnown RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 TSNQ15631 228 aaKnown RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 GPR107Q5VW38 600 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 P4HA3Q7Z4N8 544 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 GKN2Q86XP6 184 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 OLFM1Q99784 485 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 ACBD6Q9BR61 282 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 UGT2B28Q9BY64 529 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 TNKS2Q9H2K2 1166 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 POMKQ9H5K3 350 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 KLQ9UEF7 1012 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 SRRM3A6NNA2 597 aaPredicted RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 LSM1O15116 133 aaKnown RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 VNN1O95497 513 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 CCNB1P14635 433 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 CHRNB2P17787 502 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 HOXD13P35453 343 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 AVPR1BP47901 424 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 KCNJ5P48544 419 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 JAM2P57087 298 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 GHRHRQ02643 423 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 CERCAMQ5T4B2 595 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 RNF220Q5VTB9 566 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 RNF19BQ6ZMZ0 732 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 DNAJB7Q7Z6W7 309 aaPredicted RBP10.78□□□□□ -0.68
HIF3A-205ENST00000377670 PRSS58Q8IYP2 241 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 PYROXD2Q8N2H3 581 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 LIX1Q8N485 282 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 CLEC4CQ8WTT0 213 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 CD101Q93033 1021 aa10.78□□□□□ -0.68
HIF3A-205ENST00000377670 IL6P05231 212 aa10.77□□□□□ -0.68
HIF3A-205ENST00000377670 JUPP14923 745 aa10.77□□□□□ -0.68
HIF3A-205ENST00000377670 ERCC2P18074 760 aa10.77□□□□□ -0.68
HIF3A-205ENST00000377670 LPOP22079 712 aaPredicted RBP10.77□□□□□ -0.68
HIF3A-205ENST00000377670 ZIK1Q3SY52 487 aaPredicted RBP10.77□□□□□ -0.68
HIF3A-205ENST00000377670 DDI2Q5TDH0 399 aa10.77□□□□□ -0.68
HIF3A-205ENST00000377670 ENPP7Q6UWV6 458 aa10.77□□□□□ -0.68
HIF3A-205ENST00000377670 DNAJC14Q6Y2X3 702 aaPredicted RBP10.77□□□□□ -0.68
HIF3A-205ENST00000377670 SYT12Q8IV01 421 aa10.77□□□□□ -0.68
HIF3A-205ENST00000377670 SPATA6LQ8N4H0 392 aa10.77□□□□□ -0.68
HIF3A-205ENST00000377670 LMX1AQ8TE12 382 aa10.77□□□□□ -0.68
HIF3A-205ENST00000377670 CPNE1Q99829 537 aa10.77□□□□□ -0.68
HIF3A-205ENST00000377670 NUAK2Q9H093 628 aa10.77□□□□□ -0.68
HIF3A-205ENST00000377670 DMAC2Q9NW81 257 aa10.77□□□□□ -0.68
HIF3A-205ENST00000377670 EME2A4GXA9 379 aaPredicted RBP10.77□□□□□ -0.69
HIF3A-205ENST00000377670 LIN7AO14910 233 aaPredicted RBP10.77□□□□□ -0.69
HIF3A-205ENST00000377670 CILPO75339 1184 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 TSPAN9O75954 239 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 CCNYL3P0C7X3 344 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 PIM1P11309 404 aaPredicted RBP10.77□□□□□ -0.69
HIF3A-205ENST00000377670 CMPK1P30085 196 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 ARHGAP1Q07960 439 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 NEK10Q6ZWH5 1172 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 CACTIN-AS1Q8N1I8 211 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 BPIFB6Q8NFQ5 453 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 MTFMTQ96DP5 389 aaKnown RBP10.77□□□□□ -0.69
HIF3A-205ENST00000377670 RHOBTB2Q9BYZ6 727 aa10.77□□□□□ -0.69
HIF3A-205ENST00000377670 DMTF1Q9Y222 760 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms