RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.46□□□□□ -0.57
TM9SF2-201ENST00000376387 STAP1Q9ULZ2 295 aa11.46□□□□□ -0.57
TM9SF2-201ENST00000376387 ZSWIM8A7E2V4 1837 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 STMND1H3BQB6 276 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 LTA4HP09960 611 aaKnown RBP11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 HOXA11P31270 313 aaPredicted RBP11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 CASP2P42575 452 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 TMBIM6P55061 237 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 PLA2G4EQ3MJ16 856 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 PAGE3Q5JUK9 113 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 FBXO47Q5MNV8 452 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 LDLRAD1Q5T700 205 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 CLEC20AQ6ZU45 233 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 PDZD4Q76G19 769 aaPredicted RBP11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 PHYKPLQ8IUZ5 450 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 CADM3Q8N126 398 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 AFAP1L2Q8N4X5 818 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 PPHLN1Q8NEY8 458 aaKnown RBP11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 OR52K2Q8NGK3 314 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 PTERQ96BW5 349 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 HOPXQ9BPY8 73 aaPredicted RBP11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 TRIM15Q9C019 465 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 SPATC1LQ9H0A9 340 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 PLEKHA5Q9HAU0 1116 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 SLC52A3Q9NQ40 469 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 OR12D3Q9UGF7 316 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 FBXW11Q9UKB1 542 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 PSME2Q9UL46 239 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 NDUFAF1Q9Y375 327 aa11.46□□□□□ -0.58
TM9SF2-201ENST00000376387 PCP4L1A6NKN8 68 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 A8MU76 341 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 AQP9O43315 295 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 OXSR1O95747 527 aaPredicted RBP11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 HTR1AP08908 422 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 USP17L7P0C7H9 530 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 IMPDH1P20839 514 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 JAK1P23458 1154 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 TSPAN7P41732 249 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 CXCR3P49682 368 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 RAD23AP54725 363 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 POU4F1Q01851 419 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 LIPEQ05469 1076 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 SOX4Q06945 474 aaPredicted RBP11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 IMPG1Q17R60 797 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 FNDC1Q4ZHG4 1894 aaPredicted RBP11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 NEPROQ6NW34 567 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 R3HCC1LQ7Z5L2 792 aaKnown RBP11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 RIOX2Q8IUF8 465 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 RYBPQ8N488 228 aaPredicted RBP11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 B3GALNT2Q8NCR0 500 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 SLC22A17Q8WUG5 538 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 NUDT8Q8WV74 236 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 C1orf50Q9BV19 199 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 TDRD1Q9BXT4 1180 aaKnown RBP11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 DGCR6LQ9BY27 220 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 TKTL2Q9H0I9 626 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 ADNPQ9H2P0 1102 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 ALG2Q9H553 416 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 FAM124BQ9H5Z6 455 aaPredicted RBP11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 NTN4Q9HB63 628 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 TREX1Q9NSU2 369 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 ERAP1Q9NZ08 941 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 DNMT3BQ9UBC3 853 aaKnown RBP11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 MAN1A2O60476 641 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 DPEP1P16444 411 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 MLLT1Q03111 559 aaPredicted RBP11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 DNASE1L3Q13609 305 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 GEN1Q17RS7 908 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 DCAF15Q66K64 600 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 MIER2Q8N344 545 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 PDPRQ8NCN5 879 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 SH3YL1Q96HL8 342 aaPredicted RBP11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 TMEM9Q9P0T7 183 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 OAS3Q9Y6K5 1087 aaKnown RBP11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 MIA3Q5JRA6 1907 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 OR51F1A6NGY5 319 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 NCAM2O15394 837 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 BCAS1O75363 584 aaPredicted RBP11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 JRKO75564 520 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 CDK14O94921 469 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 NPR3P17342 541 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 ALAS2P22557 587 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 HRH2P25021 359 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 DNAJB1P25685 340 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 RCVRNP35243 200 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 HPCAL1P37235 193 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 IST1P53990 364 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 OXA1LQ15070 435 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 DPY19L1Q2PZI1 675 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 PLEKHG6Q3KR16 790 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 HECTD2Q5U5R9 776 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 DSG4Q86SJ6 1040 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 ISCA2Q86U28 154 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 TERB1Q8NA31 727 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 TWIST2Q8WVJ9 160 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 BIRC7Q96CA5 298 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 UBXN10Q96LJ8 280 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 RNF145Q96MT1 663 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 CHID1Q9BWS9 393 aa11.45□□□□□ -0.58
TM9SF2-201ENST00000376387 MID1IP1Q9NPA3 183 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms