RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 VPS35Q96QK1 796 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 HINFPQ9BQA5 517 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 LGR4Q9BXB1 951 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 CHRAC1Q9NRG0 131 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 SYBUQ9NX95 663 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 GRHL1Q9NZI5 618 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 FKBPLQ9UIM3 349 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 SOX13Q9UN79 622 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 OR1A2Q9Y585 309 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 SNX11Q9Y5W9 270 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 SPTBN4Q9H254 2564 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 PCNX2A6NKB5 2137 aa11.29□□□□□ -0.6
HSPG2-202ENST00000374676 ARHGEF17Q96PE2 2063 aaPredicted RBP11.28□□□□□ -0.6
HSPG2-202ENST00000374676 FAM237BA0A1B0GVD1 139 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 SRP72O76094 671 aaKnown RBP11.28□□□□□ -0.6
HSPG2-202ENST00000374676 CER1O95813 267 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 ZNF883P0CG24 379 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 PLA2G5P39877 138 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 CRADDP78560 199 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 TMPRSS15P98073 1019 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 EIF2B5Q13144 721 aaKnown RBP11.28□□□□□ -0.6
HSPG2-202ENST00000374676 PEX6Q13608 980 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 GPR33Q49SQ1 333 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 ATP13A5Q4VNC0 1218 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 DNAJC21Q5F1R6 531 aaKnown RBP11.28□□□□□ -0.6
HSPG2-202ENST00000374676 FAM151BQ6UXP7 276 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 SNX20Q7Z614 316 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 PARGQ86W56 976 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 PDIK1LQ8N165 341 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 ART4Q93070 314 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 GLYATL1Q969I3 302 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 FAM122AQ96E09 287 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 SGSM3Q96HU1 749 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 TBATAQ96M53 351 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 ZNF778Q96MU6 729 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 ELF4Q99607 663 aaPredicted RBP11.28□□□□□ -0.6
HSPG2-202ENST00000374676 NAT9Q9BTE0 207 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 DPH5Q9H2P9 285 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 GAREM1Q9H706 876 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 ASB8Q9H765 288 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 FSCN3Q9NQT6 498 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 TREX1Q9NSU2 369 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 SMOXQ9NWM0 555 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 DMGDHQ9UI17 866 aaKnown RBP11.28□□□□□ -0.6
HSPG2-202ENST00000374676 TMPRSS11EQ9UL52 423 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 LRP4O75096 1905 aa11.28□□□□□ -0.6
HSPG2-202ENST00000374676 ZFC3H1O60293 1989 aaKnown RBP11.27□□□□□ -0.61
HSPG2-202ENST00000374676 TRBV5-4A0A0C4DH59 114 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 A0A1B0GTQ1 180 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 TMEM202A6NGA9 273 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 CDX4O14627 284 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-202ENST00000374676 YKT6O15498 198 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 UGT1A9O60656 530 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 SLC25A14O95258 325 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-202ENST00000374676 PRAMEF1O95521 474 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 CSF2P04141 144 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 CEACAM5P06731 702 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 UGT1A6P19224 532 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 ITGALP20701 1170 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 UGT1A1P22309 533 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 UGT1A4P22310 534 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 MC4RP32245 332 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 UGT1A3P35503 534 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 UGT1A5P35504 534 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 ARRB1P49407 418 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-202ENST00000374676 BLKP51451 505 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 ARSDP51689 593 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 ATXN3P54252 364 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-202ENST00000374676 ARL4CP56559 192 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 SLC7A5Q01650 507 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 DHX9Q08211 1270 aaKnown RBP11.27□□□□□ -0.61
HSPG2-202ENST00000374676 NFATC2Q13469 925 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 MSS51Q4VC12 460 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 FNBP1LQ5T0N5 605 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 ENPP7Q6UWV6 458 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 TMEM135Q86UB9 458 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 CCNJLQ8IV13 435 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 AGGF1Q8N302 714 aaeCLIP11.27□□□□□ -0.61
HSPG2-202ENST00000374676 MPP5Q8N3R9 675 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 MINDY1Q8N5J2 469 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 OR56A4Q8NGH8 313 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 HDAC10Q969S8 669 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 LRRC39Q96DD0 335 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 SCARF2Q96GP6 870 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-202ENST00000374676 EBNA1BP2Q99848 306 aaKnown RBP11.27□□□□□ -0.61
HSPG2-202ENST00000374676 GTPBP2Q9BX10 602 aaKnown RBP11.27□□□□□ -0.61
HSPG2-202ENST00000374676 FAM129AQ9BZQ8 928 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 FOXP3Q9BZS1 431 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 SUDS3Q9H7L9 328 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-202ENST00000374676 UGT1A7Q9HAW7 530 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 UGT1A10Q9HAW8 530 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 UGT1A8Q9HAW9 530 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 TRIM39Q9HCM9 518 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 FAM114A2Q9NRY5 505 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 DNAAF2Q9NVR5 837 aaKnown RBP11.27□□□□□ -0.61
HSPG2-202ENST00000374676 SAMD15Q9P1V8 674 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 VPS18Q9P253 973 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 SLC2A6Q9UGQ3 507 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 SLC17A4Q9Y2C5 497 aa11.27□□□□□ -0.61
HSPG2-202ENST00000374676 FNDC3AQ9Y2H6 1198 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms