RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CREB5Q02930 508 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 GNA12Q03113 381 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 BNIP2Q12982 314 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 GRIK2Q13002 908 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 KIF19Q2TAC6 998 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 USP41Q3LFD5 358 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 MGAT5BQ3V5L5 792 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 CLEC6AQ6EIG7 209 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 CNKSR3Q6P9H4 555 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 PAOXQ6QHF9 649 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 SPATA19Q7Z5L4 167 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 DHFR2Q86XF0 187 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 LRRC43Q8N309 656 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 FBXO39Q8N4B4 442 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 PDZD8Q8NEN9 1154 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 OR52K2Q8NGK3 314 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 OVCA2Q8WZ82 227 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 EME1Q96AY2 570 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 CDKN2AIPNLQ96HQ2 116 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 PSKH2Q96QS6 385 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 TTLL2Q9BWV7 592 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 OSBPL11Q9BXB4 747 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 AKTIPQ9H8T0 292 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 MID1IP1Q9NPA3 183 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 TMEM45AQ9NWC5 275 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 MIA3Q5JRA6 1907 aa13.88□□□□□ -0.19
HMGCL-203ENST00000374490 DYTNA2CJ06 578 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 AQP12BA6NM10 295 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 GRXCR1A8MXD5 290 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 CCL22O00626 93 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 MUSKO15146 869 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 KDELR3O43731 214 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 TLR5O60602 858 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 NDUFS3O75489 264 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 SOAT2O75908 522 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 CDK14O94921 469 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 TBX18O95935 607 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 FGBP02675 491 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 ALDH2P05091 517 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 IDO1P14902 403 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 TCN1P20061 433 aaPredicted RBP13.87□□□□□ -0.19
HMGCL-203ENST00000374490 HOXD9P28356 352 aaPredicted RBP13.87□□□□□ -0.19
HMGCL-203ENST00000374490 KCNC1P48547 511 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 OXCT1P55809 520 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 SH3BP2P78314 561 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 TIAL1Q01085 375 aaKnown RBP eCLIP13.87□□□□□ -0.19
HMGCL-203ENST00000374490 LCP2Q13094 533 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 IKBKEQ14164 716 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 GALNT3Q14435 633 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 SEMA3AQ14563 771 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 OR4D1Q15615 310 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 GEN1Q17RS7 908 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 TCTN1Q2MV58 587 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 THEMIS2Q5TEJ8 643 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 IL23RQ5VWK5 629 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 ANKS6Q68DC2 871 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 OGFOD2Q6N063 350 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 CYHR1Q6ZMK1 362 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 CIR1Q86X95 450 aaPredicted RBP13.87□□□□□ -0.19
HMGCL-203ENST00000374490 AQP12AQ8IXF9 295 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 MINDY1Q8N5J2 469 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 NAT14Q8WUY8 206 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 HERVK_113Q902F9 699 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 EXT2Q93063 718 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 ATP6V1E2Q96A05 226 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 ZNF597Q96LX8 424 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 SEPT5Q99719 369 aaPredicted RBP13.87□□□□□ -0.19
HMGCL-203ENST00000374490 GPATCH1Q9BRR8 931 aaKnown RBP13.87□□□□□ -0.19
HMGCL-203ENST00000374490 TMEM175Q9BSA9 504 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 C1QTNF3Q9BXJ4 246 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 C8orf4Q9NR00 106 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 DNMT3LQ9UJW3 386 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 RNF112Q9ULX5 631 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 DNAJC15Q9Y5T4 150 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 COMMD10Q9Y6G5 202 aa13.87□□□□□ -0.19
HMGCL-203ENST00000374490 LAMA2P24043 3122 aaKnown RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 A0A0J9YYE9 177 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 TTC24A2A3L6 582 aaPredicted RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 TYW5A2RUC4 315 aaKnown RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 PRORSD1PA6NEY8 169 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 C2orf81A6NN90 581 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 SLC38A8A6NNN8 435 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 SUPT3HB4E1H0 165 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 UBXN8O00124 270 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 ANGPT2O15123 496 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 SUPT3HO75486 399 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 CRCPO75575 148 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 MLYCDO95822 493 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 CLPTM1O96005 669 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 CHEK2O96017 543 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 MTHFD2P13995 350 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 HSD17B1P14061 328 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 MSX2P35548 267 aaPredicted RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 INPP5AQ14642 412 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 RBBP5Q15291 538 aaKnown RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 PFKFB4Q16877 469 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 IL31Q6EBC2 164 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 ANKS3Q6ZW76 656 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 RPS27LQ71UM5 84 aaKnown RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 HERC6Q8IVU3 1022 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms