RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 ZNF354CQ86Y25 554 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 MYLK4Q86YV6 388 aaPredicted RBP14.25□□□□□ -0.13
HMGA1-203ENST00000374116 C10orf107Q8IVU9 208 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 PJA1Q8NG27 643 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 SPATA22Q8NHS9 363 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 WDR60Q8WVS4 1066 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 PBXIP1Q96AQ6 731 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 ZDBF2Q9HCK1 2354 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 C11orf16Q9NQ32 467 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 IARS2Q9NSE4 1012 aaKnown RBP14.25□□□□□ -0.13
HMGA1-203ENST00000374116 KIAA1522Q9P206 1035 aaPredicted RBP14.25□□□□□ -0.13
HMGA1-203ENST00000374116 NYNRINQ9P2P1 1898 aaKnown RBP14.25□□□□□ -0.13
HMGA1-203ENST00000374116 MARCOQ9UEW3 520 aaPredicted RBP14.25□□□□□ -0.13
HMGA1-203ENST00000374116 IPO11Q9UI26 975 aaKnown RBP14.25□□□□□ -0.13
HMGA1-203ENST00000374116 VPS28Q9UK41 221 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 SIT1Q9Y3P8 196 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 A0A096LPK6 155 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 ITM2AO43736 263 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 HLA-DQB2P05538 268 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 SERPINA6P08185 405 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 RALBP11234 206 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 ANPEPP15144 967 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 STK19P49842 368 aaPredicted RBP14.25□□□□□ -0.13
HMGA1-203ENST00000374116 CDC16Q13042 620 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 GAS6Q14393 721 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 PLEKHG6Q3KR16 790 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 TMCO4Q5TGY1 634 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 IZUMO2Q6UXV1 221 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 RPLP0P6Q8NHW5 317 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 PTCD2Q8WV60 388 aaKnown RBP14.25□□□□□ -0.13
HMGA1-203ENST00000374116 SREK1Q8WXA9 508 aaKnown RBP14.25□□□□□ -0.13
HMGA1-203ENST00000374116 ALG14Q96F25 216 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 RILPQ96NA2 401 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 MTG2Q9H4K7 406 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 ZNF232Q9UNY5 417 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 ANKRD6Q9Y2G4 727 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 DNAJC16Q9Y2G8 782 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 WDR37Q9Y2I8 494 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 SLC27A6Q9Y2P4 619 aa14.25□□□□□ -0.13
HMGA1-203ENST00000374116 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.24□□□□□ -0.13
HMGA1-203ENST00000374116 CBX4O00257 560 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 MT-CYBP00156 380 aaPredicted RBP14.24□□□□□ -0.13
HMGA1-203ENST00000374116 APOA4P06727 396 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 IDO1P14902 403 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 POLD2P49005 469 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 ABCE1P61221 599 aaKnown RBP14.24□□□□□ -0.13
HMGA1-203ENST00000374116 GNA12Q03113 381 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 UGP2Q16851 508 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 IL31Q6EBC2 164 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 AAGABQ6PD74 315 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 RANBP10Q6VN20 620 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 RINLQ6ZS11 566 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 PPHLN1Q8NEY8 458 aaKnown RBP14.24□□□□□ -0.13
HMGA1-203ENST00000374116 OR6Y1Q8NGX8 325 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 GFM2Q969S9 779 aaKnown RBP14.24□□□□□ -0.13
HMGA1-203ENST00000374116 HMCESQ96FZ2 354 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 ATXN7L3BQ96GX2 97 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 VPS39Q96JC1 886 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 GPR22Q99680 433 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 SLC2A11Q9BYW1 496 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 MRM3Q9HC36 420 aaKnown RBP14.24□□□□□ -0.13
HMGA1-203ENST00000374116 RBM22Q9NW64 420 aaKnown RBP eCLIP14.24□□□□□ -0.132e-14■■■■■ 28.5
HMGA1-203ENST00000374116 ELOVL2Q9NXB9 296 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 NDE1Q9NXR1 346 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 CACNA2D2Q9NY47 1150 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 TAS2R1Q9NYW7 299 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 ARMCX1Q9P291 453 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 MID2Q9UJV3 735 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 OR51B4Q9Y5P0 310 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 WASF2Q9Y6W5 498 aa14.24□□□□□ -0.13
HMGA1-203ENST00000374116 K7ERQ8 282 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 RAMP2O60895 175 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 FKBP6O75344 327 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 H2AFYO75367 372 aaKnown RBP14.23□□□□□ -0.13
HMGA1-203ENST00000374116 LYPLA1O75608 230 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-203ENST00000374116 MT-CO1P00395 513 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 C2P06681 752 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 HLA-EP13747 358 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 POLR2EP19388 210 aaKnown RBP14.23□□□□□ -0.13
HMGA1-203ENST00000374116 DRD1P21728 446 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 KIR2DL1P43626 348 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-203ENST00000374116 POLD3Q15054 466 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-203ENST00000374116 KIAA0907Q7Z7F0 614 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-203ENST00000374116 SETD3Q86TU7 594 aaPredicted RBP14.23□□□□□ -0.13
HMGA1-203ENST00000374116 CNTN4Q8IWV2 1026 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 AHI1Q8N157 1196 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 TEX26Q8N6G2 289 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 IPMKQ8NFU5 416 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 ZNF778Q96MU6 729 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 SORT1Q99523 831 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 FICDQ9BVA6 458 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 CCDC106Q9BWC9 280 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 RHOJQ9H4E5 214 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 ATP13A1Q9HD20 1204 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 TIMMDC1Q9NPL8 285 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 TBCCD1Q9NVR7 557 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 DNAJC28Q9NX36 388 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 TAGLN3Q9UI15 199 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 SLCO3A1Q9UIG8 710 aa14.23□□□□□ -0.13
HMGA1-203ENST00000374116 MRPS17Q9Y2R5 130 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms