RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 NFKBIL1Q9UBC1 381 aaPredicted RBP18.42■□□□□ 0.54
CDX4-201ENST00000373514 C2orf81A6NN90 581 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 CDX4O14627 284 aaPredicted RBP18.41■□□□□ 0.54
CDX4-201ENST00000373514 TRIM23P36406 574 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 EIF2B5Q13144 721 aaKnown RBP18.41■□□□□ 0.54
CDX4-201ENST00000373514 MORF4L2Q15014 288 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 LRRC8BQ6P9F7 803 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 DOK6Q6PKX4 331 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 MACC1Q6ZN28 852 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 HDXQ7Z353 690 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 RAVER1Q8IY67 606 aaKnown RBP18.41■□□□□ 0.54
CDX4-201ENST00000373514 RBFAQ8N0V3 343 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 MPP5Q8N3R9 675 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 SKA1Q96BD8 255 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 PDXPQ96GD0 296 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 ZNF778Q96MU6 729 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 SERPINB12Q96P63 405 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 TEX101Q9BY14 249 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 IL26Q9NPH9 171 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 KCTD5Q9NXV2 234 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 SLC2A6Q9UGQ3 507 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 KLF15Q9UIH9 416 aa18.41■□□□□ 0.54
CDX4-201ENST00000373514 ASCC3Q8N3C0 2202 aaKnown RBP18.4■□□□□ 0.54
CDX4-201ENST00000373514 GLYATL1P3A0A0U1RQE8 302 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 RGSL1A5PLK6 1076 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 TMEM202A6NGA9 273 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 MAGEC1O60732 1142 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 MYCLP1P12525 358 aaPredicted RBP18.4■□□□□ 0.54
CDX4-201ENST00000373514 KIAA1024LP59773 190 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 YPEL5P62699 121 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 CASP8Q14790 479 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 SHBQ15464 509 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 ZNF423Q2M1K9 1284 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 ZNF648Q5T619 568 aaPredicted RBP18.4■□□□□ 0.54
CDX4-201ENST00000373514 ADAMTSL4Q6UY14 1074 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 AGGF1Q8N302 714 aaeCLIP18.4■□□□□ 0.54
CDX4-201ENST00000373514 TRAM1L1Q8N609 369 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 FAM174AQ8TBP5 190 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 PWWP2AQ96N64 755 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 PLEKHG4BQ96PX9 1271 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 FUT8Q9BYC5 575 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 TCEAL2Q9H3H9 227 aaPredicted RBP18.4■□□□□ 0.54
CDX4-201ENST00000373514 FGF22Q9HCT0 170 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 MRPL40Q9NQ50 206 aaKnown RBP18.4■□□□□ 0.54
CDX4-201ENST00000373514 TMPRSS11EQ9UL52 423 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 CNOT6Q9ULM6 557 aaKnown RBP18.4■□□□□ 0.54
CDX4-201ENST00000373514 TCAF1Q9Y4C2 921 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 OAS3Q9Y6K5 1087 aaKnown RBP18.4■□□□□ 0.54
CDX4-201ENST00000373514 DNAH14Q0VDD8 3507 aa18.4■□□□□ 0.54
CDX4-201ENST00000373514 MROH6A6NGR9 719 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 SDC3O75056 442 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 BANF1O75531 89 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 CER1O95813 267 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 ARSDP51689 593 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 ATXN3P54252 364 aaPredicted RBP18.39■□□□□ 0.54
CDX4-201ENST00000373514 CDK16Q00536 496 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 DHX9Q08211 1270 aaKnown RBP18.39■□□□□ 0.54
CDX4-201ENST00000373514 TCEA2Q15560 299 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 CHRNA6Q15825 494 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 ATP13A5Q4VNC0 1218 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 PARGQ86W56 976 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 MREGQ8N565 214 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 PPHLN1Q8NEY8 458 aaKnown RBP18.39■□□□□ 0.54
CDX4-201ENST00000373514 WDR92Q96MX6 357 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 RANBP9Q96S59 729 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 ELF4Q99607 663 aaPredicted RBP18.39■□□□□ 0.54
CDX4-201ENST00000373514 TRIM56Q9BRZ2 755 aaKnown RBP18.39■□□□□ 0.54
CDX4-201ENST00000373514 ZDHHC5Q9C0B5 715 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 SUDS3Q9H7L9 328 aaPredicted RBP18.39■□□□□ 0.54
CDX4-201ENST00000373514 PHPT1Q9NRX4 125 aaPredicted RBP18.39■□□□□ 0.54
CDX4-201ENST00000373514 RAD18Q9NS91 495 aa18.39■□□□□ 0.54
CDX4-201ENST00000373514 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.39■□□□□ 0.53
CDX4-201ENST00000373514 HEATR9A2RTY3 570 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 CACNB4O00305 520 aaPredicted RBP18.39■□□□□ 0.53
CDX4-201ENST00000373514 PRAMEF1O95521 474 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 PRSS56P0CW18 603 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 TEAD1P28347 426 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 POLD2P49005 469 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 XIAPP98170 497 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 PEX6Q13608 980 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 ALG11Q2TAA5 492 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 IL27RAQ6UWB1 636 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 ENPP7Q6UWV6 458 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 HOOK3Q86VS8 718 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 CCDC25Q86WR0 208 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 MCUQ8NE86 351 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 OR13J1Q8NGT2 312 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 TSACCQ96A04 125 aaPredicted RBP18.39■□□□□ 0.53
CDX4-201ENST00000373514 HIC2Q96JB3 615 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 ZSCAN5AQ9BUG6 496 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 TXLNGYQ9BZA5 131 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 TMEM9BQ9NQ34 198 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 CHRAC1Q9NRG0 131 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 NLE1Q9NVX2 485 aaPredicted RBP18.39■□□□□ 0.53
CDX4-201ENST00000373514 DNAJC28Q9NX36 388 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 KLQ9UEF7 1012 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 TMEM98Q9Y2Y6 226 aa18.39■□□□□ 0.53
CDX4-201ENST00000373514 A0A1B0GTQ1 180 aa18.38■□□□□ 0.53
CDX4-201ENST00000373514 OR51F1A6NGY5 319 aa18.38■□□□□ 0.53
CDX4-201ENST00000373514 C4orf47A7E2U8 309 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms