RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 C1orf50Q9BV19 199 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 BRD9Q9H8M2 597 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 COPS7BQ9H9Q2 264 aaPredicted RBP12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 GPATCH2LQ9NWQ4 482 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 HCFC1R1Q9NWW0 138 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 BFARQ9NZS9 450 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 FBXW11Q9UKB1 542 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 FZD10Q9ULW2 581 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 RNF11Q9Y3C5 154 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 PIAS3Q9Y6X2 628 aa12.86□□□□□ -0.35
CHCHD1-202ENST00000372837 NOTCH4Q99466 2003 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 HEATR9A2RTY3 570 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 PIRO00625 290 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 AIM2O14862 343 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 TRIM24O15164 1050 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 UGT1A9O60656 530 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 HUS1O60921 280 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 RPP40O75818 363 aaKnown RBP12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 C8AP07357 584 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 UMPSP11172 480 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 XRCC1P18887 633 aaPredicted RBP12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 NOS2P35228 1153 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 NAA20P61599 178 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 MRPS22P82650 360 aaKnown RBP12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 FOXM1Q08050 763 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 PTK2BQ14289 1009 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 PAFAH1B3Q15102 231 aaKnown RBP12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 ANO4Q32M45 955 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 LSM12Q3MHD2 195 aaKnown RBP12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 SLC9B1Q4ZJI4 515 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 XKR4Q5GH76 650 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 NHSL2Q5HYW2 709 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 PPM1LQ5SGD2 360 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 LIMS2Q7Z4I7 341 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 SCUBE3Q8IX30 993 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 KLHDC8BQ8IXV7 354 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 ZNF781Q8N8C0 355 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 DEFB124Q8NES8 71 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 GABPB2Q8TAK5 448 aaPredicted RBP12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 PTCD2Q8WV60 388 aaKnown RBP12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 ELSPBP1Q96BH3 223 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 MAGED4Q96JG8 741 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 KCTD15Q96SI1 283 aaPredicted RBP12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 TCF12Q99081 682 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 C9orf16Q9BUW7 83 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 SLC25A23Q9BV35 468 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 GATA5Q9BWX5 397 aaPredicted RBP12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 UGT1A7Q9HAW7 530 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 UGT1A10Q9HAW8 530 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 UGT1A8Q9HAW9 530 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 EML4Q9HC35 981 aaKnown RBP12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 FAM49BQ9NUQ9 324 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 SNTG2Q9NY99 539 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 DTLQ9NZJ0 730 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 TUBGCP4Q9UGJ1 667 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 CD300AQ9UGN4 299 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 TRHDEQ9UKU6 1024 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 USP3Q9Y6I4 520 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 COL4A2P08572 1712 aa12.85□□□□□ -0.35
CHCHD1-202ENST00000372837 A0A096LPK6 155 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 LNP1A1A4G5 178 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 TCAF2A6NFQ2 919 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 NRG2O14511 850 aaPredicted RBP12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 NOL3O60936 208 aaKnown RBP12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 ATP6V1B1P15313 513 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 FCARP24071 287 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 PCSK6P29122 969 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 OR1G1P47890 313 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 HCAR3P49019 387 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 MRPL19P49406 292 aaKnown RBP12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 SULT1E1P49888 294 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 SCNN1BP51168 640 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 PSME3P61289 254 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 CDKL1Q00532 357 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 RELAQ04206 551 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 IFRD2Q12894 506 aaPredicted RBP12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 INPP5AQ14642 412 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 CA9Q16790 459 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 SOWAHAQ2M3V2 549 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 GRAMD4Q6IC98 578 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 C8orf82Q6P1X6 216 aaPredicted RBP12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 NCCRP1Q6ZVX7 275 aaPredicted RBP12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 HOMEZQ8IX15 550 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 C12orf29Q8N999 325 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 STYXQ8WUJ0 223 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 NTAN1Q96AB6 310 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 ISOC1Q96CN7 298 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 PGBD4Q96DM1 585 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 NRBF2Q96F24 287 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 PIWIL1Q96J94 861 aaKnown RBP12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 GPR22Q99680 433 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 TRIM62Q9BVG3 475 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 GPR62Q9BZJ7 368 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 ZNF334Q9HCZ1 680 aaPredicted RBP12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 SPAG4Q9NPE6 437 aa12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 CCM2LQ9NUG4 571 aaPredicted RBP12.84□□□□□ -0.35
CHCHD1-202ENST00000372837 DNMT3BQ9UBC3 853 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms