RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PIAS4Q8N2W9 510 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 HNRNPABQ99729 332 aaKnown RBP13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 DPEP3Q9H4B8 488 aa13.29□□□□□ -0.28
RAPGEF1-201ENST00000372189 FGF1P05230 155 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 HPCAL1P37235 193 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 GSSP48637 474 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 QPCTQ16769 361 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 ZNF792Q3KQV3 632 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 PTPN20Q4JDL3 420 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 CDC73Q6P1J9 531 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 CCDC71Q8IV32 467 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 SLC41A1Q8IVJ1 513 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 AMER2Q8N7J2 671 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 FZD8Q9H461 694 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 PTPRHQ9HD43 1115 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 ZNF451Q9Y4E5 1061 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 E9PAM4 449 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 AP3D1O14617 1153 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 EDF1O60869 148 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 LTA4HP09960 611 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 S100A3P33764 101 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 ERVK-21P61565 698 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 CRADDP78560 199 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 COL9A3Q14050 684 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 ZNF846Q147U1 533 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 FAM187BQ17R55 369 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 BBS12Q6ZW61 710 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 STAG3L4Q8TBR4 150 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 TEKT5Q96M29 485 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 FERD3LQ96RJ6 166 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 CLK4Q9HAZ1 481 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 TMEM216Q9P0N5 145 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 NDRG2Q9UN36 371 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 PCDHB9Q9Y5E1 797 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 A0A1W2PQ45 241 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 A0A1W2PQY0 241 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 TRIM3O75382 744 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 SEC24AO95486 1093 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 RPL22P35268 128 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 GPR15P49685 360 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 CLCN5P51795 746 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 POU5F1Q01860 360 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 SLC5A9Q2M3M2 681 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 IRF2BP2Q7Z5L9 587 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 OR6K2Q8NGY2 324 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 NDRG1Q92597 394 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 PIGKQ92643 395 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 PLD4Q96BZ4 506 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 POLR1BQ9H9Y6 1135 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 CYP7B1O75881 506 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 SLC25A14O95258 325 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 UQCRBP14927 111 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 RAB4AP20338 218 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 RGS6P49758 472 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 DGCR6Q14129 220 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 DDI2Q5TDH0 399 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 ZDHHC20Q5W0Z9 365 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 USP7Q93009 1102 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 CPXM1Q96SM3 734 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 MOV10Q9HCE1 1003 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 PCDH18Q9HCL0 1135 aa13.28□□□□□ -0.28
RAPGEF1-201ENST00000372189 H3BN98 237 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 EPHX1P07099 455 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 ADRA1BP35368 520 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 ETV5P41161 510 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 ALFQ53S48 1182 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 MZT2AQ6P582 158 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 RDH11Q8TC12 318 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 MTFMTQ96DP5 389 aaKnown RBP13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 KLHL5Q96PQ7 755 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 ZNF624Q9P2J8 865 aaPredicted RBP13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 GTF2A1LQ9UNN4 478 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 AP4B1Q9Y6B7 739 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 ALOX5P09917 674 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 SLC35G4P0C7Q5 338 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 RHBGQ9H310 441 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 ACSS3Q9H6R3 686 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 ZFP14Q9HCL3 533 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 ENTPD4Q9Y227 616 aa13.27□□□□□ -0.28
RAPGEF1-201ENST00000372189 TULP2O00295 520 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 ACSL4O60488 711 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 WASP42768 502 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 TAS2R40P59535 323 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 NAA20P61599 178 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 ARL14EPQ8N8R7 260 aaPredicted RBP13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 TCF12Q99081 682 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 RETREG1Q9H6L5 497 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 TRIM36Q9NQ86 728 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 NPPAP01160 153 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 PIRTP0C851 137 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 GTF2E2P29084 291 aaKnown RBP13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 IFNGR2P38484 337 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 GABRB2P47870 512 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 TPGS2Q68CL5 300 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 KBTBD2Q8IY47 623 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 BPIFB6Q8NFQ5 453 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 KBTBD8Q8NFY9 601 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 ANKRD49Q8WVL7 239 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 CERS2Q96G23 380 aa13.27□□□□□ -0.29
RAPGEF1-201ENST00000372189 ALG9Q9H6U8 611 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms