RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 ARMCX6Q7L4S7 300 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 ERI1Q8IV48 349 aaKnown RBP12.77□□□□□ -0.37
GPC3-201ENST00000370818 CARNMT1Q8N4J0 409 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 RMDN1Q96DB5 314 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 YME1L1Q96TA2 773 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 FEM1AQ9BSK4 669 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 ZBED2Q9BTP6 218 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 ZNF696Q9H7X3 374 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 NLE1Q9NVX2 485 aaPredicted RBP12.77□□□□□ -0.37
GPC3-201ENST00000370818 KIAA1522Q9P206 1035 aaPredicted RBP12.77□□□□□ -0.37
GPC3-201ENST00000370818 RAI2Q9Y5P3 530 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 CPQQ9Y646 472 aa12.77□□□□□ -0.37
GPC3-201ENST00000370818 H0Y626 953 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 NRG2O14511 850 aaPredicted RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 HDAC3O15379 428 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 ZBTB14O43829 449 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 SORBS2O94875 1100 aaKnown RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 CNPP09543 421 aaKnown RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 LINC00271P0C7V0 271 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 HDCP19113 662 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 FDXRP22570 491 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 STT3AP46977 705 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 KPNA2P52292 529 aaKnown RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 NAA20P61599 178 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 TYSND1Q2T9J0 566 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 GRAMD1BQ3KR37 738 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 GPR158Q5T848 1215 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 OGFRL1Q5TC84 451 aaPredicted RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 MRNIPQ6NTE8 343 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 AHI1Q8N157 1196 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 PHTF2Q8N3S3 785 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 OR4K2Q8NGD2 314 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 GIPC3Q8TF64 312 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 DDI1Q8WTU0 396 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 POMKQ9H5K3 350 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 PLGRKTQ9HBL7 147 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 CATSPERZQ9NTU4 200 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 LAMA3Q16787 3333 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 MYOCOSA0A1B0GUC4 107 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 TGM5O43548 720 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 KLHL41O60662 606 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 CRTAMO95727 393 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 JUNP05412 331 aaKnown RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 RAG1P15918 1043 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 NCF2P19878 526 aaPredicted RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 CES1P23141 567 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 PSMA3P25788 255 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 KCNC1P48547 511 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 STC1P52823 247 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 CYP4F8P98187 520 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 ACAP2Q15057 778 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 PTPRRQ15256 657 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 FAM45BPQ6NSW5 357 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 PGM2L1Q6PCE3 622 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 IYDQ6PHW0 289 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 GLT6D1Q7Z4J2 308 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 CCNYL1Q8N7R7 359 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 LPCAT1Q8NF37 534 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 FAM45AQ8TCE6 357 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 PDCD6IPQ8WUM4 868 aaKnown RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 TMA16Q96EY4 203 aaKnown RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 ALG14Q96F25 216 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 ZBP1Q9H171 429 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 WDR55Q9H6Y2 383 aaPredicted RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 TCF7L2Q9NQB0 619 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.76□□□□□ -0.37
GPC3-201ENST00000370818 THEGQ9P2T0 379 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 LHX3Q9UBR4 397 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 MAFFQ9ULX9 164 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 DTNAQ9Y4J8 743 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 GOLGA8QA0A0J9YX86 632 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 GOLGA8OA6NCC3 632 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 A8MT66 165 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 MEI4A8MW99 385 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 GOLGA8NF8WBI6 632 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 H3BNX3 289 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 NPHS1O60500 1241 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 FGF18O76093 207 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 TNFAIP8O95379 198 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 OGNP20774 298 aaKnown RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 SLC26A3P40879 764 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 ACADVLP49748 655 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 CLCN2P51788 898 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 NR1H2P55055 460 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 TRAF2Q12933 501 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 SPIDRQ14159 915 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 GK3PQ14409 553 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 TAF1AQ15573 450 aaPredicted RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 RALGPS1Q5JS13 557 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 MFSD4BQ5TF39 518 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 SEL1L3Q68CR1 1132 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 DHRS4L2Q6PKH6 230 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 OTOP2Q7RTS6 562 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 PIWIL4Q7Z3Z4 852 aaKnown RBP12.76□□□□□ -0.37
GPC3-201ENST00000370818 ISCA2Q86U28 154 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 ITIH5Q86UX2 942 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 FAM217AQ8IXS0 508 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 POU5F2Q8N7G0 328 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 KDM1BQ8NB78 822 aa12.76□□□□□ -0.37
GPC3-201ENST00000370818 HJURPQ8NCD3 748 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms