RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 EVA1BQ9NVM1 165 aa13.67□□□□□ -0.22
SSR4-202ENST00000370085 NLE1Q9NVX2 485 aaPredicted RBP13.67□□□□□ -0.22
SSR4-202ENST00000370085 PIH1D1Q9NWS0 290 aaKnown RBP13.67□□□□□ -0.22
SSR4-202ENST00000370085 VPS18Q9P253 973 aa13.67□□□□□ -0.22
SSR4-202ENST00000370085 RIMKLBQ9ULI2 386 aa13.67□□□□□ -0.22
SSR4-202ENST00000370085 DOLKQ9UPQ8 538 aa13.67□□□□□ -0.22
SSR4-202ENST00000370085 UTP11Q9Y3A2 253 aaKnown RBP13.67□□□□□ -0.22
SSR4-202ENST00000370085 DGKBQ9Y6T7 804 aa13.67□□□□□ -0.22
SSR4-202ENST00000370085 CFAP54Q96N23 3096 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 PRSS38A1L453 326 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 MAGEB16A2A368 324 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 EFCAB8A8MWE9 144 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 DNALI1O14645 258 aaPredicted RBP13.66□□□□□ -0.22
SSR4-202ENST00000370085 TTI1O43156 1089 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 LDB2O43679 373 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 VEGFDO43915 354 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 PIAS2O75928 621 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 PRAMEF1O95521 474 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 SOD1P00441 154 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 RALBP11234 206 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 PPARGP37231 505 aaPredicted RBP13.66□□□□□ -0.22
SSR4-202ENST00000370085 PTGIRP43119 386 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 IL9RQ01113 521 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 EIF2B5Q13144 721 aaKnown RBP13.66□□□□□ -0.22
SSR4-202ENST00000370085 GTF2H3Q13889 308 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 MORF4L2Q15014 288 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 RSPO4Q2I0M5 234 aaPredicted RBP13.66□□□□□ -0.22
SSR4-202ENST00000370085 PRAMEF14Q5SWL7 426 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 CASC4Q6P4E1 433 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 DOK6Q6PKX4 331 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 RD3Q7Z3Z2 195 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 GKN2Q86XP6 184 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 ZNF398Q8TD17 642 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 HEXDCQ8WVB3 486 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 TSACCQ96A04 125 aaPredicted RBP13.66□□□□□ -0.22
SSR4-202ENST00000370085 SNF8Q96H20 258 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 COX14Q96I36 57 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 AGAP2Q99490 1192 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 LGR4Q9BXB1 951 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 ASB8Q9H765 288 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 CYP4F12Q9HCS2 524 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 TCAF1Q9Y4C2 921 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 MRFAP1Q9Y605 127 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 CSNK1G3Q9Y6M4 447 aa13.66□□□□□ -0.22
SSR4-202ENST00000370085 CTAGE15A4D2H0 777 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 TMEM202A6NGA9 273 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 MROH6A6NGR9 719 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 SDR42E2A6NKP2 422 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 FADS2P1A8MWK0 482 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 H7C0S8 307 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 AQP9O43315 295 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 SRP72O76094 671 aaKnown RBP13.65□□□□□ -0.22
SSR4-202ENST00000370085 IVLP07476 585 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 CTAGE8P0CG41 777 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 PAMP19021 973 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 DGKAP23743 735 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 GRIA1P42261 906 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 PRAMEP78395 509 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 TMPRSS15P98073 1019 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 C2orf54Q08AI8 447 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 ILF3Q12906 894 aaKnown RBP eCLIP13.65□□□□□ -0.22
SSR4-202ENST00000370085 CALCOCO2Q13137 446 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 MSLNQ13421 630 aaPredicted RBP13.65□□□□□ -0.22
SSR4-202ENST00000370085 CHRNA6Q15825 494 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 ALG11Q2TAA5 492 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 GPR33Q49SQ1 333 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 ATP13A5Q4VNC0 1218 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 CCDC38Q502W7 563 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 ZNF542PQ5EBM4 170 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 DNAJC21Q5F1R6 531 aaKnown RBP13.65□□□□□ -0.22
SSR4-202ENST00000370085 PRRT3Q5FWE3 981 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 DNTTIP2Q5QJE6 756 aaKnown RBP13.65□□□□□ -0.22
SSR4-202ENST00000370085 IZUMO3Q5VZ72 239 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 KDM7AQ6ZMT4 941 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 SNX20Q7Z614 316 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 CTAGE6Q86UF2 777 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 GALNT13Q8IUC8 556 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 NAXDQ8IW45 347 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 CTAGE4Q8IX94 777 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 PELI3Q8N2H9 469 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 CEP112Q8N8E3 955 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 OR13C4Q8NGS5 318 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 LMX1AQ8TE12 382 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 RHBDD1Q8TEB9 315 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 SAP25Q8TEE9 199 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 GLMNQ92990 594 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 DCUN1D1Q96GG9 259 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 DNAJC1Q96KC8 554 aaKnown RBP13.65□□□□□ -0.22
SSR4-202ENST00000370085 CDC6Q99741 560 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 CARS2Q9HA77 564 aaKnown RBP13.65□□□□□ -0.22
SSR4-202ENST00000370085 MRM3Q9HC36 420 aaKnown RBP13.65□□□□□ -0.22
SSR4-202ENST00000370085 TRIM39Q9HCM9 518 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 SMOXQ9NWM0 555 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 NCKIPSDQ9NZQ3 722 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 FKBPLQ9UIM3 349 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 CRLS1Q9UJA2 301 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 ANAPC5Q9UJX4 755 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 SLC17A4Q9Y2C5 497 aa13.65□□□□□ -0.22
SSR4-202ENST00000370085 ZNF106Q9H2Y7 1883 aaKnown RBP13.65□□□□□ -0.22
SSR4-202ENST00000370085 CFAP99D6REC4 459 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms