RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 SRFBP1Q8NEF9 429 aaKnown RBP8.54□□□□□ -1.04
LCA5-201ENST00000369846 JPH3Q8WXH2 748 aaPredicted RBP8.54□□□□□ -1.04
LCA5-201ENST00000369846 DCPSQ96C86 337 aaKnown RBP8.54□□□□□ -1.04
LCA5-201ENST00000369846 ZNF347Q96SE7 839 aa8.54□□□□□ -1.04
LCA5-201ENST00000369846 HNRNPABQ99729 332 aaKnown RBP8.54□□□□□ -1.04
LCA5-201ENST00000369846 WACQ9BTA9 647 aa8.54□□□□□ -1.04
LCA5-201ENST00000369846 DPCDQ9BVM2 203 aaPredicted RBP8.54□□□□□ -1.04
LCA5-201ENST00000369846 ZYG11BQ9C0D3 744 aa8.54□□□□□ -1.04
LCA5-201ENST00000369846 DHX33Q9H6R0 707 aaKnown RBP8.54□□□□□ -1.04
LCA5-201ENST00000369846 NANSQ9NR45 359 aa8.54□□□□□ -1.04
LCA5-201ENST00000369846 OPTCQ9UBM4 332 aa8.54□□□□□ -1.04
LCA5-201ENST00000369846 NCKAP1Q9Y2A7 1128 aa8.54□□□□□ -1.04
LCA5-201ENST00000369846 RFXANKO14593 260 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 CYP27B1O15528 508 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 RFPL2O75678 378 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 IL7P13232 177 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 IDO1P14902 403 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 ITGA2P17301 1181 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 PSMB4P28070 264 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 CYP24A1Q07973 514 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 LSM12Q3MHD2 195 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 GPR153Q6NV75 609 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 MOXD1Q6UVY6 613 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 CYP20A1Q6UW02 462 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 LRRN1Q6UXK5 716 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 KIF18BQ86Y91 864 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 UBR7Q8N806 425 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 SLC44A1Q8WWI5 657 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 KAT2AQ92830 837 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 SLITRK1Q96PX8 696 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 CDK5RAP1Q96SZ6 601 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 GAL3ST1Q99999 423 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 CDADC1Q9BWV3 514 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 IDI2Q9BXS1 227 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 POLR2J2Q9GZM3 115 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 ZNHIT2Q9UHR6 403 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 POLR1DQ9Y2S0 133 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 CLCA3PQ9Y6N3 262 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 DIP2AQ14689 1571 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 EML1O00423 815 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 MSH4O15457 936 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 REM1O75628 298 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 OR6A2O95222 327 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 LSM8O95777 96 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 C8BP07358 591 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 VDRP11473 427 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 POU2F1P14859 743 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 HNRNPH3P31942 346 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 CRKLP46109 303 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 RORCP51449 518 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 BCAT1P54687 386 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 SNRPFP62306 86 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 PTPN11Q06124 597 aaPredicted RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 CTBP1Q13363 440 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 VMACQ2NL98 169 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 ZNF467Q7Z7K2 595 aaPredicted RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 PIAS4Q8N2W9 510 aaPredicted RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 STAG3L4Q8TBR4 150 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 BARD1Q99728 777 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 C7orf50Q9BRJ6 194 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 PPIL3Q9H2H8 161 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 TP63Q9H3D4 680 aaPredicted RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 ELAC1Q9H777 363 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 ELL3Q9HB65 397 aaPredicted RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 TAS2R9Q9NYW1 312 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 COPZ2Q9P299 210 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 MED1Q15648 1581 aaPredicted RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 A8MU76 341 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 SGCEO43556 437 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 ULK1O75385 1050 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 PTPN1P18031 435 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 BMP7P18075 431 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 PBX1P40424 430 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 PPM1JQ5JR12 505 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 ATF7IP2Q5U623 682 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 TMEM236Q5W0B7 351 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 C14orf80Q86SX3 495 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 CUZD1Q86UP6 607 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 SLITRK4Q8IW52 837 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 TCEAL3Q969E4 200 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 TMEM203Q969S6 136 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 MKL1Q969V6 931 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 MED8Q96G25 268 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 PRKD2Q9BZL6 878 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 PCDHB16Q9NRJ7 776 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 C14orf119Q9NWQ9 140 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 ZNF225Q9UK10 706 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 PDE4DIPQ5VU43 2346 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 DNAJA2O60884 412 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 MYCP01106 439 aaPredicted RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 HLA-DQA2P01906 255 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 SLC2A3P11169 496 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 SLC7A1P30825 629 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 GRK5P34947 590 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 PCDH1Q08174 1060 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 ILF3Q12906 894 aaKnown RBP eCLIP8.53□□□□□ -1.04
LCA5-201ENST00000369846 KLF1Q13351 362 aaPredicted RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 CDKL4Q5MAI5 379 aa8.53□□□□□ -1.04
LCA5-201ENST00000369846 ZC3HC1Q86WB0 502 aaKnown RBP8.53□□□□□ -1.04
LCA5-201ENST00000369846 MIB1Q86YT6 1006 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms